Protein

View in Explore
Genbank accession
XSB45117.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,94
TF
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MATRYYSSVAAETTLVASITNGNTSIQIASATGLPALTPFTLALDYEAATEELVEVTAVAGTTLTVTRGIDGTSAASHNAGARVRHVSSARDFADSRTHESTATNVHGTAVGSAVVGTNDTQTLSNKTLNDATGTLSNIDIFANSPTWVTTVNADIAGTADIMKWLRDSSEPHEVAKITNNGALFLRNQNVAADSALSTYRLRITKDNGTTDIFSVLSGGTITPWTDAGQSGLQVKPRTTNNDVAIRVRNSTDTADTFAAWNNGRVDINGTDPAFSQLDVHGASGQTAACMRVMNNDESVTHFTVAGNGAASFGSSLTVAGAQTNNGLVVANAGVDVTGNVTVSGTLSVTGQTSASGTSVITAAAGFSVDAATQAVIKGGWIIVTGVLLRTGGTLTASATGNLTDTALCTIASTYRPDSVFGSDRMVTSFGTGFTSGGVGLNPSTGAVELLDAHSTSTIDTGHTVRFTYVYPQ
Physico‐chemical
properties
protein length:473 AA
molecular weight: 48410,64040 Da
isoelectric point:5,01680
aromaticity:0,05497
hydropathy:-0,00529

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSB45117.1
1 473
Domain Start End Length (AA) Confidence
N-terminal 1 123 123 0,7870
Central domain 124 322 200 0,0912
C-terminal 323 473 150 0,9743
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-123
Central
124-322
C-terminal
323-473

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Gremlin23
[NCBI] 		3384972 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB45117.1 [NCBI]
Genbank nucleotide accession
PV467699 [NCBI]
CDS location
range 23427 -> 24848
strand +
CDS
ATGGCTACCCGTTACTACTCCAGCGTGGCCGCAGAGACCACGCTGGTGGCTTCCATCACGAATGGAAACACGAGCATCCAGATCGCTTCGGCGACTGGTCTGCCAGCCCTGACGCCGTTCACGCTGGCTCTCGACTACGAGGCTGCAACCGAGGAGCTGGTCGAGGTCACCGCTGTAGCGGGTACCACCCTGACCGTAACCCGAGGTATCGATGGCACTTCTGCGGCGTCTCACAACGCCGGAGCGAGGGTGCGTCACGTCAGCTCCGCACGAGACTTCGCAGACTCTCGTACCCACGAGAGCACGGCTACCAACGTTCACGGTACCGCTGTCGGATCGGCCGTCGTGGGTACGAATGATACCCAGACCCTATCAAACAAGACCCTGAACGATGCGACTGGCACGCTGTCGAACATCGACATCTTCGCCAACAGCCCCACCTGGGTGACCACGGTCAACGCGGACATCGCGGGTACGGCTGACATCATGAAGTGGCTGAGGGATTCCTCCGAGCCGCACGAGGTTGCCAAGATCACCAACAACGGTGCACTCTTCCTGCGCAACCAGAACGTCGCAGCGGACTCCGCCCTCTCCACGTACAGGCTGAGGATCACCAAGGACAACGGAACTACGGACATCTTCTCCGTTCTCTCTGGTGGAACCATCACGCCATGGACTGACGCAGGTCAGTCCGGTCTACAGGTCAAGCCTCGCACCACCAACAACGACGTTGCCATCCGAGTCAGGAACAGCACTGACACGGCGGACACCTTCGCTGCATGGAACAACGGTCGAGTAGACATCAACGGTACCGACCCGGCGTTCTCTCAGCTCGACGTCCATGGTGCAAGCGGCCAGACGGCCGCGTGCATGAGGGTGATGAACAACGATGAGTCTGTCACCCACTTCACCGTGGCCGGTAACGGTGCTGCATCCTTCGGGTCCAGCCTCACTGTGGCTGGCGCCCAGACCAACAACGGTCTGGTCGTAGCCAACGCCGGAGTGGACGTCACTGGCAACGTCACCGTATCGGGCACGCTCAGCGTGACCGGTCAGACCAGCGCAAGCGGTACCTCGGTGATCACTGCGGCAGCCGGATTCAGCGTGGATGCAGCCACTCAGGCTGTCATCAAGGGTGGCTGGATCATCGTTACTGGCGTCCTCCTGCGCACTGGTGGCACGCTCACGGCGTCCGCAACGGGTAACCTGACCGACACTGCCCTGTGCACGATCGCGTCCACCTACAGGCCGGACAGCGTCTTCGGCTCCGACCGCATGGTGACCTCGTTCGGTACTGGATTCACCTCCGGTGGAGTCGGGCTGAACCCGTCGACCGGAGCGGTCGAGCTTCTCGACGCGCACAGCACCAGCACCATCGACACCGGTCACACCGTGCGCTTCACCTACGTCTACCCACAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
87dfaa6c7d7d380435d137ee28e337f41bd0def92ec04bdc647084a7f84346d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7394
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50