Protein

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UniProt accession
A0A8S5VLC6 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MGTLRGEKMAFKKITDADLKGKGNVGRPDTPGVSTAEMQRIMDEIPREVIVPIFNQLVTALNEMALENRTHNEGGCLYIRLNSDKVIETSSDGKTWQATGSSGHLILDYSGEAMPQRSRMQFMGATVTDNGGVTQITLRKGDTGAQGPQGPVGPQGPAGAQGNIGPQGPQGIQGPRGVQGLNGAQGPTGATGPTGPQGPRGEKGADGTSFVVLGRYNSLTLLEGAHPTGNKGDAYAVGSETDNVVYLWDVDAKKWNPIGSLQGPQGPQGAQGPQGATGDTGPKGPQGEVGPEGPQGIQGEKGETGERGPQGIQGLTGEQGPIGATGPQGEKGDPGVIQNVNGKTGESVWLNAEDVGAENKHSYKTVTVAASSWTDGSYTVFWDDGSTSSYTTCATVTVAGVTADSRIAVSDRTRVTDAVRMVAALEPGAGLVKFYANSAPTSAAVFVLEVSQ
Physico‐chemical
properties
protein length:452 AA
molecular weight: 46440,78020 Da
isoelectric point:5,01612
aromaticity:0,04867
hydropathy:-0,50000

Domains

Domains [InterPro]
DC_0575
ATT
9–125
DC_0575 IPR008160 IPR008160 DC_1264
IPR050149
Unmapped
140–344
IPR050149
DC_1340
STR
165–296
DC_1340
G3DSA:1.20.5.320
STR
180–218
G3DSA:1.20.5.320
A0A8S5VLC6
1 452
Architecture
ATT
STR
RBD
ATT 9-125 | STR 140-335 | RBD 355-452
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ackermannviridae sp
[NCBI] 		2831612 Uroviricota > Caudoviricetes > Pantevenvirales >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAG91109.1 [NCBI]
Genbank nucleotide accession
BK035285 [NCBI]
CDS location
range 9381 -> 10739
strand +
CDS
ATGGGAACTTTAAGGGGTGAGAAAATGGCATTTAAGAAAATTACAGACGCAGATTTAAAAGGCAAAGGTAATGTAGGGCGGCCAGACACGCCGGGCGTATCTACCGCAGAGATGCAACGCATTATGGATGAAATACCGCGAGAAGTCATTGTGCCGATTTTCAACCAGCTTGTGACGGCCCTGAACGAAATGGCGCTGGAAAACCGCACCCACAATGAGGGCGGCTGCCTGTATATCCGGCTGAACAGCGATAAAGTCATTGAGACGAGCAGCGACGGCAAGACCTGGCAGGCTACCGGCAGCAGCGGCCATTTGATACTGGACTATAGCGGCGAGGCAATGCCGCAGCGAAGCCGGATGCAGTTTATGGGCGCGACTGTGACTGACAATGGCGGTGTGACACAGATAACGCTGCGCAAAGGTGATACCGGCGCACAAGGCCCGCAAGGTCCGGTAGGCCCGCAGGGGCCAGCAGGTGCACAGGGCAATATTGGCCCGCAGGGGCCGCAGGGAATTCAAGGCCCGCGCGGCGTGCAGGGTTTGAACGGCGCACAAGGGCCTACCGGCGCAACAGGCCCGACAGGCCCGCAAGGGCCGCGGGGTGAGAAGGGCGCAGACGGCACGAGCTTTGTTGTGCTGGGGCGCTACAACAGCCTAACGCTGCTGGAAGGGGCACACCCCACCGGCAACAAGGGCGACGCTTACGCGGTAGGCAGCGAAACCGACAACGTTGTGTACCTGTGGGATGTAGACGCCAAGAAATGGAACCCAATCGGCAGTTTGCAAGGCCCGCAGGGGCCGCAGGGCGCACAGGGACCGCAAGGCGCTACCGGGGATACAGGCCCGAAGGGGCCGCAGGGTGAAGTTGGCCCGGAAGGGCCGCAGGGCATCCAGGGGGAAAAGGGAGAAACAGGCGAGCGAGGGCCACAGGGAATCCAGGGCTTGACAGGTGAGCAAGGCCCAATCGGCGCGACAGGCCCACAGGGTGAGAAAGGCGACCCGGGCGTTATCCAGAACGTGAACGGAAAGACCGGGGAATCGGTATGGCTGAATGCGGAGGATGTTGGCGCAGAAAACAAGCATAGCTACAAAACCGTTACGGTGGCAGCCAGCTCCTGGACGGATGGCAGCTACACAGTGTTCTGGGACGACGGCAGCACGAGCAGCTACACCACCTGCGCCACAGTCACGGTGGCCGGGGTGACGGCAGACAGCCGGATTGCCGTAAGTGACCGCACGAGAGTGACGGATGCGGTGCGGATGGTAGCCGCGCTGGAACCCGGAGCCGGGTTGGTTAAGTTTTATGCGAACAGTGCGCCGACGAGTGCGGCGGTGTTTGTTTTGGAGGTGAGCCAATGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
7a5627e55b21be92cdc63a7dfa0785412e3d8c57057e5cf855b844c855c43a7d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6417
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50