Protein

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UniProt accession
S5VMI6 [UniProt]
Protein name
Uncharacterized protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MYDQNGEIYFSPYNIGQTFYDGDTVVAGWGLEIVYETAQVFLIKLIARPSTTSYQGVFDGGGYGTCALAMLFKSNKSVQNELLGNFDIHYLGRTPDSALGANDGKTTFLVQSHLLRSHSYQTGIVDDLGTSTGHGAKFHLLQLDESVNIQSHPAWKFSLLARVGSGIQGFIAPKQKLLIAFDKSTCRYDEDDRIVGFSFAGADTAKVAESWPLLSAAMQFGLDDNLSVFNVDFTGPSTFGVVASPKLPLPAQWLSAQWLLNSGTSNNFVLSLANGKSWSYVHDGLKYLAVFLNATGFDEYRYSDTTSFANVRTPPALPPLLFRAPINDQGVVSGPWSVTEYPVHFGIGLRERAMLLTESRKRLVMAHEQVRYAFRQLNTPTVDPQNVIVTIDAATGEHEIHRLPEGDQFEIGIVSFGVSGEDVYVLTRDFCQYVLRPNGILPTLSLDKETYQRGDTATLTITVPESCRVKLELFGCRYEGNRNIDVLVAASEQLQLDVVGCVEVHVTYCEPEVQE
Physico‐chemical
properties
protein length:515 AA
molecular weight: 56826,39780 Da
isoelectric point:5,05528
aromaticity:0,10874
hydropathy:-0,08369

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
S5VMI6
1 515
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,0190
Central domain 165 363 200 0,4049
C-terminal 364 515 151 0,8308
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-363
C-terminal
364-515

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGS82139.1 [NCBI]
Genbank nucleotide accession
KF147891 [NCBI]
CDS location
range 217574 -> 219121
strand +
CDS
ATGTACGATCAGAACGGGGAGATTTACTTCTCCCCATACAACATCGGTCAGACGTTCTATGACGGTGATACCGTTGTTGCCGGTTGGGGACTGGAGATCGTATACGAGACTGCTCAGGTCTTCTTGATCAAGTTGATTGCCCGTCCAAGCACGACCTCCTATCAGGGCGTTTTCGATGGTGGTGGTTACGGCACGTGCGCTCTTGCCATGCTGTTCAAGTCCAACAAGAGCGTGCAAAACGAACTGCTCGGAAACTTCGACATCCACTATCTTGGACGCACGCCAGATAGTGCCCTGGGCGCGAACGACGGAAAGACAACCTTTTTGGTGCAGTCGCATCTGTTGCGCTCACACTCGTATCAAACTGGCATAGTGGATGACTTGGGTACAAGCACAGGACACGGTGCAAAATTCCACTTGTTGCAGTTGGACGAGTCCGTGAATATCCAGTCGCACCCTGCTTGGAAGTTCTCGCTTCTGGCAAGAGTCGGCTCTGGCATTCAAGGTTTCATTGCACCAAAGCAGAAATTGCTCATTGCCTTCGACAAGTCGACCTGCCGGTACGACGAAGACGACCGCATCGTCGGCTTTTCTTTCGCTGGTGCTGATACTGCTAAAGTTGCCGAATCGTGGCCGTTGTTGTCAGCGGCTATGCAATTCGGATTGGACGACAATCTGTCCGTGTTCAACGTGGACTTTACCGGACCTTCGACCTTTGGTGTGGTAGCGTCTCCGAAGTTGCCTCTGCCTGCCCAGTGGCTTTCCGCCCAATGGTTGCTGAACAGTGGCACATCCAACAACTTCGTACTGTCGCTCGCTAATGGTAAGTCGTGGTCGTATGTCCATGACGGCCTGAAGTATCTGGCTGTATTCCTGAATGCTACTGGCTTCGATGAATATCGGTACAGCGACACGACCAGCTTTGCCAACGTGCGTACTCCGCCAGCACTGCCTCCTTTGCTCTTTCGTGCGCCGATCAACGACCAGGGAGTCGTGTCTGGACCGTGGAGTGTGACGGAGTATCCTGTGCATTTTGGCATTGGTTTGCGCGAACGTGCGATGCTGCTGACTGAATCCAGGAAGCGTCTGGTCATGGCTCACGAACAAGTGCGCTACGCCTTTCGCCAACTGAACACGCCGACAGTCGATCCGCAAAACGTCATCGTTACGATTGACGCTGCGACAGGCGAGCATGAAATACACAGGCTGCCAGAGGGCGATCAGTTCGAGATCGGTATCGTGTCCTTCGGCGTCAGTGGCGAGGATGTTTACGTTCTCACCCGAGATTTCTGCCAATACGTGCTGCGTCCAAATGGCATCCTCCCGACGCTGTCGCTGGACAAAGAGACATACCAGCGTGGAGATACCGCGACGCTGACCATCACCGTCCCGGAGTCGTGTCGTGTTAAGCTGGAGCTGTTCGGATGCAGGTACGAGGGTAACCGCAATATCGATGTCTTGGTCGCCGCAAGCGAGCAACTACAATTAGACGTGGTAGGCTGCGTTGAAGTGCATGTTACCTACTGCGAACCGGAGGTGCAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae9a6859a0f82d5aa9bdcdd1e365d689ac22630b4625616ef3d60b819b24e62d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5246
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50