Protein

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Genbank accession
XYM49038.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSQPRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQNYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVSQYCDELVPDNRGGMEPRYLMDMIVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDAENQYEQDVEPVFNADAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALASASLTGKIGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTMIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSPWTDYARGMSSTDVSIITDQILDEILDSDAMKELQESAQDSASKLNDYANSIIQNALANDADVRVMRKENGKRKAEISHTTVLIANETEARAAEITQLKTQIDEDITSQITILNEALADESETRATQINQLQTQFGEDMEAGFTQVNEAIANESEARATSEAALDAKIGENSAALDQKLDSWANVDGVGSMYTMKLGLKYNGQEYNSGMALQLTAQGNNVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFINSLLVQDGSITNAKIGQYIQSNNFISGQQGWSINKSGASEFNNVVVRGALFAASGNFGFDGGNGVVINGNGVTVNLDGGGRIVLGRF
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 126824,25640 Da
isoelectric point:4,60358
aromaticity:0,09391
hydropathy:-0,27470

Domains

Domains [InterPro]
DC_0014
STR
1–1150
DC_0014
IPR053171
Unmapped
3–868
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR036116
IPR013783
STR
627–720
IPR013783
XYM49038.1
1 1150
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM49038.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,9050
Central domain 501 1079 580 0,0617
C-terminal 1080 1150 70 0,6480
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1079
C-terminal
1080-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Kpn01BRG
[NCBI] 		3403491 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM49038.1 [NCBI]
Genbank nucleotide accession
PV081216.1 [NCBI]
CDS location
range 21006 -> 24458
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCCAGCCGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATCAAGTTATTGCTGGCCGTTTCTGACGGCGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGCGGCGTTCCGGTTCAGAACGAAGACGGGAGCTATAACTATGAGGGCGTAATTGCAGAATTTCGCCCCGGTACGCAAACGCAGAATTACATCCAGGGCTTCAGTGAATCAAGCGCTGAATTCCAGGTTGCACGCGACGTTACCTTTAACACGCCGTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAATGGCGATATGGTCGGTTCGGTCGTTGAGTACAAGATCGAAATGGCGGTTGACGGTGCGAGCTATCAAACCTACTTGACCGACAAAATCGACGGTAAAAACACGACTGGCGGTTACGATCGCAGTATTCGCGTCAACTTGCCGCAAGACTTCACGTCGCAGGTGCTTATCCGTGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTGGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATTGATGCTAAATTCCGTTACCCGCTGACGGCAATGCTTTACGTTGAGTTTGATAGCGATCTGTTCCAGAACCAGATCCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTATCCAGGTTCCAAGCAACTACGACCCCGTTAACAGGACATATGCCGGAACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAACAACCCGGCCTGGGTTCTTTACGACCTGATCATGAATCAGCGCTATGGGTTAGACCAGCGCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGGTGTCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGTTACCTGATGGATATGATCGTGCAGTCGCAGGTCGAAGCCTTCCAGTTGGTAAGGGATGTTTGTTCCGCATTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGACAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGATGGCGTATTCGTTCGAACTTTTCCGAGCGAAAAAACGATGTACACGTCATGCAACGTAATGTTCGACGACGCAGAGAACCAGTACGAACAGGACGTTGAACCAGTATTCAACGCTGACGCTGCCATGCGGTTCGGTCACAACCCGACAAGCATCACAGCGATCGGTTGCACCAGACGAACAGAAGCAAACCGCCGTGGGCGCTGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGCCTGGAAGGCATGATCCCGTCATGCGGAGATGTGATTTACGTTGCAGATCCGCATTGGCAATCAGCCTTTAACCTGGTTTTGTCAGGTCGCATTATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCGGGCGATACGCTGATTCTGAACACCGACGACGGTAAGCCATTACGCCGAACCATTGCCAGCGTATCGGCAGACGGAAAAACCCTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAACTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTCGCAATCACAGCCACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCTGATTCAATGGGAGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGGATGAGCGTCGAGACGATGGTAATCGGCTGGTCTGCCGTGCAGTACGCAAAACTTTACGAGGTGCAATGGCGTAAGGATGGCGGCAACTGGAACAACGTACCGCGCACAGCGACAACGCAGGTTGATATTGAGGGGATTTATGCTGGCGAATACCAGGCGCGCGTAAGGTGCATTAGCGGCGGCAATATCGCGTCTCCGTGGTCTGCTTTGGCTAGTGCATCGCTGACCGGGAAAATTGGAGCGCCGAAAGGGCCAATTAACCTTTTCGCGTCGGATAATGAAATCTTTGGGATTCGCGTTAAGTGGGCCATGCCTGAAGGTGCAGAGGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACTATGATTCCTTACCCGGCGGCTGAATACTGGCACTCAATTTTGCCCGCTGGCTATGTGAACTGGTACAAGGCGCGAAGCGTCGACAGGATCGGCAACGTTTCACCCTGGACTGATTACGCTCGCGGTATGTCATCGACTGACGTTAGCATCATCACAGATCAGATTCTGGATGAAATTCTGGATAGCGATGCCATGAAGGAGTTGCAGGAGAGCGCACAGGACAGCGCTTCTAAACTCAACGACTACGCGAACAGCATCATTCAGAACGCGTTAGCCAACGATGCAGACGTCAGGGTTATGCGCAAGGAGAACGGAAAGCGTAAGGCGGAAATCTCGCATACCACTGTGCTGATCGCTAACGAGACTGAAGCGCGGGCGGCTGAGATCACACAGCTTAAAACGCAGATTGATGAAGATATCACGTCGCAGATTACGATCCTGAACGAAGCGCTGGCGGATGAAAGCGAAACGCGAGCAACCCAAATCAACCAGTTGCAAACGCAATTTGGGGAGGATATGGAAGCCGGGTTTACGCAGGTCAACGAGGCGATCGCAAACGAAAGTGAAGCGCGCGCAACGTCCGAGGCGGCGTTAGATGCCAAAATCGGCGAGAACTCCGCAGCATTAGATCAGAAACTGGATTCGTGGGCCAATGTTGATGGCGTCGGTTCCATGTACACAATGAAGTTAGGTCTGAAGTATAACGGGCAGGAATATAATTCCGGGATGGCGTTACAGCTTACCGCACAAGGAAACAACGTTGTTTCGCAAGTGCTGTTTATTGCCGATAGATTTGCTATCATCCGCAATGCGGCATCCGGCGCTTACACGCTTCCGTTTGTTGTGCAGAATGACCAGGTGTTTATTAACAGCTTGCTCGTTCAGGATGGCTCGATTACCAACGCCAAGATCGGACAGTATATCCAGTCCAACAACTTTATTTCGGGCCAGCAGGGGTGGAGCATCAACAAGTCCGGCGCGTCTGAGTTCAATAACGTTGTCGTTCGCGGTGCGCTTTTTGCTGCGTCTGGTAACTTCGGATTCGATGGCGGAAACGGTGTGGTAATCAACGGTAACGGCGTCACCGTCAACCTTGACGGCGGCGGGCGAATTGTTTTAGGGAGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d517afde471ee66c0c231fdc3c8cbaecf08f3846c7025be4005ef455a2654596
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50