Protein

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Genbank accession
WVX92433.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSFFAGKLNNKSILSLRRGSGGDTNQHINPDSQTIFHSDMPHVIITETHSTGLRLDQGAGDYYWSDMPSRITQLHNNDPNRVVLTEIEFSDGSRHMLSGMSMGVGAKAYGIINPQVMSQGGLKTQITASADLSLDVGYFNSGTSGTIPQKLRDGTGCQHMFGAFSGRRGFASSAMYLGGAALYKSAWDGSGYIVPAAGSITIPSDYVRHPGARNFGFNAIYVRGRSCNRVLYGMEGPNYTTAGAVHGASSSGALNFMSNPSNPSAPKYSVGFARADPTNYAYWESMGDPNDAANGPIGIYSEHLGIYPSKITWYVTNLVYNGSGYSIDSGLFTGNDIKLSPREFIIKGINVNNTSWKFINFVEKNFNVGGRADFRDVGCNLSMGSPSTGVSGIATFGLPTAESNNTPSIKGGNVGGLNTNVVSIYNFLPSASWYVSSDPPKIGSNYGDVWSENLLPLRLLGGSGSTVLSGNIVFQGNGYVHVGTVGLDLNSSRNGAIVCTMEFLDDTWLSAGGIGCFNPTEMLSKGAEYGDSRFRMGGNTIDKKLHQILSLPAGEYVPFFTIKGTVVNACKLQAAAYNPTPYWVSGLPGSVGQTGYYTLTYYMRNDGNNNISIWLESSMSNIIGMKACLPNIKLIIQRLT
Physico‐chemical
properties
protein length:640 AA
molecular weight: 68560,18110 Da
isoelectric point:8,01930
aromaticity:0,10469
hydropathy:-0,18406

Domains

Domains [InterPro]
IPR059609
RBD
1–640
IPR059609
WVX92433.1
1 640
Architecture
RBD
RBD 1-640
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVX92433.1
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,1013
Central domain 157 355 200 0,3148
C-terminal 356 640 284 0,9235
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-355
C-terminal
356-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HZ_ZJUN2
[NCBI] 		3119841 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli NDM-1
[NCBI] 		1411081 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVX92433.1 [NCBI]
Genbank nucleotide accession
PP216084.1 [NCBI]
CDS location
range 10295 -> 12217
strand +
CDS
ATGAGTTTTTTCGCTGGCAAGCTAAATAACAAATCTATACTCTCTCTACGTAGGGGTAGTGGCGGAGATACTAATCAACATATTAATCCTGACTCTCAGACCATATTCCATTCAGATATGCCCCATGTAATTATAACGGAAACTCATTCCACGGGGTTAAGACTAGATCAAGGGGCTGGAGACTACTATTGGTCTGATATGCCTAGCAGAATCACCCAGTTACATAATAATGATCCTAATAGGGTTGTGCTGACGGAGATTGAGTTCTCAGATGGCTCTAGACATATGCTATCTGGCATGTCTATGGGGGTAGGGGCTAAAGCGTATGGAATTATAAATCCGCAGGTCATGTCTCAAGGTGGTTTAAAAACACAAATAACAGCTAGTGCTGATCTATCTCTTGATGTAGGCTATTTTAATAGTGGAACTAGTGGAACTATTCCCCAGAAGCTTAGAGACGGTACTGGATGTCAGCATATGTTTGGCGCCTTTAGTGGACGTAGAGGGTTTGCATCTAGTGCAATGTATTTAGGGGGTGCCGCTCTCTATAAATCTGCCTGGGACGGTTCAGGATATATTGTGCCTGCTGCAGGATCCATAACTATCCCTAGCGACTACGTTAGGCATCCCGGAGCTAGAAACTTTGGATTTAACGCCATATATGTTCGTGGTAGATCTTGTAATAGAGTTCTTTATGGTATGGAAGGGCCCAACTACACCACTGCTGGAGCTGTACATGGGGCGTCGAGTTCAGGGGCTCTTAACTTTATGTCTAATCCTAGCAATCCCTCGGCCCCTAAGTACTCTGTAGGTTTCGCACGTGCTGATCCCACTAACTATGCGTATTGGGAAAGTATGGGTGATCCGAATGATGCTGCTAATGGGCCCATAGGTATATATAGTGAGCACCTCGGTATTTATCCATCTAAAATTACCTGGTATGTTACTAACTTAGTGTATAATGGTTCAGGATATAGTATTGATAGTGGGCTATTTACTGGCAATGATATTAAACTTAGTCCAAGAGAATTTATTATTAAAGGTATTAACGTTAATAATACATCGTGGAAGTTTATTAACTTTGTTGAGAAAAACTTTAATGTAGGGGGCAGAGCTGATTTTCGTGATGTTGGGTGTAACTTGAGTATGGGTTCCCCCTCTACTGGAGTTTCTGGAATAGCCACTTTTGGATTACCAACTGCGGAGAGTAATAACACTCCTAGTATTAAGGGGGGTAACGTTGGTGGTTTAAATACTAATGTAGTTAGTATTTATAACTTTTTACCTTCAGCATCTTGGTATGTTTCTAGTGATCCCCCAAAAATAGGCAGCAATTATGGGGATGTTTGGAGTGAGAATCTTTTACCTTTAAGGTTACTAGGAGGTAGCGGAAGTACTGTACTATCTGGTAACATAGTATTTCAGGGTAATGGTTACGTGCATGTTGGTACCGTGGGACTGGATCTTAATAGTAGTAGAAATGGTGCAATTGTATGTACTATGGAGTTCCTAGATGACACATGGTTGTCTGCCGGTGGTATTGGCTGCTTTAATCCTACGGAGATGCTATCTAAAGGTGCAGAATACGGAGATAGTAGGTTCAGAATGGGTGGCAATACTATTGATAAAAAGCTACACCAAATATTATCTTTGCCTGCGGGGGAATACGTACCATTTTTTACTATTAAAGGTACTGTAGTAAACGCTTGTAAATTACAGGCTGCTGCGTACAACCCAACTCCGTACTGGGTATCTGGGTTGCCCGGATCCGTAGGTCAAACAGGTTACTATACTCTAACATATTATATGAGAAATGATGGAAATAATAATATCTCTATTTGGTTAGAATCCTCTATGAGCAATATAATTGGCATGAAAGCATGCTTACCAAATATTAAACTTATAATTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb184eeea7d64d97f5b04d07bb7c74839a91b83bfe405192b965728020c3f374
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2709
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50