Protein

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Genbank accession
QQG32231.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLTNDQKVQVRETLKAILSTGESLVVFEKADGTIRSMRCTRDKDILPSDFEVVAESQVKRKEAVDMLPVYDTEKESWRAFSFDKLISVNGVKAEHLVQLITH
Physico‐chemical
properties
protein length:103 AA
molecular weight: 11739,36330 Da
isoelectric point:6,10953
aromaticity:0,05825
hydropathy:-0,32524

Domains

Domains [InterPro]
IPR024401
STR
13–87
IPR024401
QQG32231.1
1 103
Architecture
STR
STR 13-87 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CkP1
[NCBI] 		2799684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter koseri
[NCBI] 		545 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG32231.1 [NCBI]
Genbank nucleotide accession
MW239124.1 [NCBI]
CDS location
range 133098 -> 133409
strand -
CDS
ATGAAATTGACAAATGATCAAAAAGTACAAGTACGTGAAACTCTGAAAGCTATTTTAAGCACTGGTGAGTCTCTGGTAGTGTTTGAAAAGGCTGATGGAACTATTCGTTCTATGCGCTGTACTCGAGACAAAGATATTCTGCCCAGCGATTTTGAAGTAGTTGCAGAATCTCAAGTTAAGCGCAAAGAAGCTGTTGATATGCTTCCGGTATATGATACTGAAAAAGAATCCTGGCGTGCATTTAGTTTTGATAAATTGATTTCTGTTAATGGTGTTAAAGCTGAACATCTGGTTCAACTGATTACTCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d8b5fc282ce085badeba71edc56afff454f2faded23cee1f29c54c07579182c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8721
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
CkP1, a S16-like broad-host-range myovirus, recognizes Citrobacter koseri lipopolysaccharide through its long tail fibres Oliveira,H., Santos,S., Pires,D., Pinto,G., Carrera,J., Briers,Y., Schmelcher,M., Dotsch,A. and Azeredo,J. 2022 — GenBank