Protein

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Genbank accession
XYR96018.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MPISISGDGAITGATTSYSFDQSVSVGGTVTYEDVTNVDSVGVITARNGIEVTGGNVHIAGVGATIGVTTAYISSINDLNYPSAGPLSNRNLIINGAMQVAQRGTTETQSQYSNYPICDRWRVQLDNASQATFTQETSGGPSGFPTFFKWNVDSVDSSIATASNVYLNQRIEGLNLQSLGYGAASAKTLTMSFYVKGNRTGTYVLEISRPNESRHIAKTYTIDTADTWEYKTITFPGDTTNSITDSNSEGFRIKWWLQAGTNFTTGTLPANWAAESNVNRAAGQSVNLHDDAGANWNITGVQLEVGERATPFEHRSYGDELARCQRYCVRFNYPDSTYAALGSLQSSASPRGAVIHYPVSMRTTAVAVDVTFSGTGTSAGNLTFLQPNTANPTTVGTLTGLGNSPESVHIYGNGFTSIGSIGQTSVLYAYAGAWLQVSVEL
Physico‐chemical
properties
protein length:441 AA
molecular weight: 46935,03650 Da
isoelectric point:5,07233
aromaticity:0,09524
hydropathy:-0,21882

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYR96018.1
1 441
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,9274
Central domain 26 224 200 0,1345
C-terminal 225 441 216 0,9151
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-224
C-terminal
225-441

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage RB11-B
[NCBI] 		3412546 Viruses >
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYR96018.1 [NCBI]
Genbank nucleotide accession
PV261925.1 [NCBI]
CDS location
range 185606 -> 186931
strand -
CDS
ATGCCAATTTCAATTTCAGGCGACGGTGCAATTACTGGCGCAACTACAAGTTATTCCTTTGACCAGAGTGTATCTGTAGGTGGTACAGTCACATATGAAGATGTTACCAATGTAGATTCTGTTGGTGTTATTACTGCACGTAATGGTATTGAAGTTACAGGAGGTAATGTTCATATTGCTGGTGTTGGTGCTACGATCGGTGTAACAACGGCATATATTAGTAGTATTAATGACCTAAATTATCCTTCTGCTGGTCCATTAAGTAATCGTAACCTGATTATTAATGGCGCTATGCAAGTGGCGCAGAGGGGTACCACTGAAACTCAAAGCCAATACTCGAACTATCCTATTTGTGATCGGTGGCGAGTGCAGCTAGATAATGCTTCTCAAGCCACATTCACTCAAGAAACATCAGGCGGACCAAGCGGGTTTCCTACTTTTTTCAAATGGAATGTAGATAGCGTCGATTCTAGTATTGCTACTGCTTCAAACGTATACCTCAACCAAAGGATAGAAGGTCTTAACCTACAAAGCCTAGGTTATGGTGCAGCCAGTGCAAAAACTTTAACAATGTCTTTTTATGTAAAAGGCAACAGAACTGGGACGTATGTTTTAGAAATATCCAGACCGAATGAAAGCAGACATATCGCAAAGACTTATACGATTGACACTGCCGATACTTGGGAATATAAGACCATTACATTCCCTGGCGACACTACGAATTCAATTACAGACAGTAATAGTGAAGGCTTCAGAATCAAGTGGTGGTTACAGGCGGGTACAAACTTTACCACTGGAACACTTCCTGCGAATTGGGCTGCTGAGTCAAACGTAAATAGAGCCGCTGGTCAATCAGTCAATTTACATGACGATGCTGGAGCAAACTGGAACATTACAGGTGTTCAATTAGAAGTCGGCGAAAGAGCCACACCTTTTGAACATCGTTCTTATGGTGATGAGCTTGCTAGGTGTCAAAGATATTGTGTCAGATTTAATTACCCAGACTCTACTTATGCTGCTCTAGGAAGTTTACAAAGCTCCGCCTCTCCTCGTGGGGCAGTTATCCATTATCCCGTTTCGATGAGAACCACAGCTGTTGCGGTCGATGTGACATTTTCTGGAACAGGTACTTCGGCTGGAAATTTGACATTTTTACAACCAAACACCGCAAATCCCACCACAGTAGGAACACTTACTGGTTTAGGTAATTCCCCAGAATCGGTACATATCTATGGAAATGGATTCACTAGTATTGGTAGTATAGGACAGACATCGGTTCTTTATGCTTACGCAGGAGCATGGCTACAAGTGTCTGTAGAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8dfec2877707c3e491b7edd6f021cb3886e366e8584fc2c4d9827681c56ea1fe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8933
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50