Protein

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Genbank accession
YP_006383636.1 [GenBank]
Protein name
EPS depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADEKIRVTELPVKSEITPGGKMLVSQNGIDWQTDVGALMLKANNLSDVDAPKSRGNLNVYSKEEVDDKVSGGGIPDQIQEPDGFKYIGRVPSFAALVSVVPEKAGERVIVSGHVAGNDYGGGVFVARAGSVAINDGGTIMPVNNNFYWQRLVEDPGTLDVTHFGAKRDGVTDCATACLAMWNYTQSLGAGGSMIGIQFPAGEFAVSNIDISANYVGNFRLVGKGVVTTFGYFPATRIKLIGADNQAAFKVQARRSEIANLQIYGQYEVKANTRGFFKNTCVSGQYVHGVNWRSTYTGGPIFDLMDTLDTKFSEFYASYVYGGVIYGVPSGSESGSWDHLTAIELSNFNVQRCYGKQAFDLQKSGQSFIYNGWIEKTDFPGDLSNGQWIIQGLSMEDCVNPLDLTFTRAQLSQINLQGTSALRYDNPDKSRLLSTYEMGRNRVEAYGAQFFGSLSYDYLSSHYRLSNATDKAAWFNLGKMIVTNQNDASRIRFFGANGQASVPSDQGAFDSNNFGGGECLLTLRRVPGTGTRQDCAIEVHGNSPIADIRISRPYENDVEIYVQLKPQCGFVNVSLETSTNSRFDSGTRFLWTYSGAPVTDDAIAGMTLYSPRKTVAFGTFGAGLTIMEDKTLGFTGRDLIDGKMPFMHNGKVYLMPLVVSPDGSDSFARTGEIDGTKIDNLLGGNLNQGWVNSFKSGADAQNGSLNLSVKAGAAISVNTAIADLVSELTIVSGPANTGTAISTSVDFRKPNGGTGQNTLRVVFAGKVDGKNTIRLAKRVSGVTTTISPQDGFINDGQVLKIYTKGNVIRVYADDVLIWDLTDDQLLTGTYFGFGTASTNAGMIVSKLKFYKA
Physico‐chemical
properties
protein length:852 AA
molecular weight: 91988,14600 Da
isoelectric point:5,62367
aromaticity:0,10094
hydropathy:-0,19261

Domains

Domains [InterPro]
DC_0717
ATT
63–185
DC_0717 DC_0716
IPR012334
STR
155–418
IPR012334 DC_0966
IPR011050
STR
156–322
IPR011050 G3DSA:2.60.120.560
YP_006383636.1
1 852
Architecture
ATT
STR
RBD
ATT 63-185 | STR 186-695 | RBD 696-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006383636.1
1 852
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,9926
Central domain 175 492 319 0,9879
C-terminal 493 852 359 0,6073
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-492
C-terminal
493-852

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XveM_DIBBI
[NCBI] 		1129194 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006383636.1 [NCBI]
Genbank nucleotide accession
NC_017981 [NCBI]
CDS location
range 22965 -> 25523
strand +
CDS
ATGGCAGACGAAAAGATCAGAGTAACGGAGCTACCCGTAAAGAGCGAAATCACCCCAGGCGGGAAAATGCTCGTTAGCCAGAATGGGATCGATTGGCAGACTGACGTTGGCGCTCTGATGCTGAAGGCAAACAACCTTTCAGACGTAGATGCGCCAAAGTCACGCGGCAACCTGAACGTCTACTCAAAGGAAGAGGTTGACGACAAGGTTTCTGGCGGTGGAATCCCAGATCAGATCCAGGAGCCGGACGGCTTTAAGTATATTGGTCGAGTTCCATCATTCGCGGCTCTGGTGTCAGTAGTTCCAGAGAAGGCGGGCGAGCGCGTAATTGTTAGCGGCCATGTTGCTGGTAATGACTACGGCGGCGGTGTGTTTGTGGCTCGCGCTGGTTCCGTTGCTATCAATGACGGCGGCACAATTATGCCGGTCAACAATAATTTCTACTGGCAGCGCCTGGTGGAAGACCCCGGCACTCTGGATGTGACTCACTTCGGAGCTAAACGCGACGGCGTTACTGACTGCGCCACGGCCTGCCTGGCGATGTGGAACTACACCCAAAGCCTGGGCGCTGGCGGCAGCATGATCGGCATTCAGTTCCCGGCTGGTGAGTTCGCCGTGAGCAACATCGACATTTCAGCAAACTATGTCGGTAACTTCCGTCTTGTTGGCAAGGGTGTCGTTACTACCTTCGGATATTTCCCAGCCACGAGAATCAAGCTGATTGGCGCAGATAATCAGGCCGCTTTCAAAGTTCAGGCCCGCCGCTCAGAGATCGCGAACCTCCAGATCTACGGCCAGTACGAAGTCAAAGCCAACACGCGTGGATTCTTCAAAAACACATGTGTGTCAGGTCAGTATGTTCACGGAGTAAACTGGCGCTCCACTTACACTGGCGGACCTATCTTCGATCTCATGGATACACTGGATACAAAATTCAGTGAGTTCTATGCCAGCTATGTTTATGGCGGCGTGATCTACGGCGTACCGTCTGGATCTGAATCTGGCTCATGGGACCACTTGACCGCGATTGAACTCAGCAACTTCAACGTCCAGCGCTGCTACGGTAAACAGGCTTTTGACCTGCAAAAATCCGGGCAGTCATTCATCTATAACGGATGGATCGAGAAGACCGACTTCCCTGGCGATCTGTCTAACGGGCAGTGGATCATTCAGGGCTTGAGCATGGAAGATTGCGTTAACCCGCTGGATCTGACGTTCACCCGCGCTCAATTGAGCCAGATCAACCTCCAGGGAACGTCTGCGCTGCGCTATGACAACCCGGATAAATCCCGCCTTCTCAGCACCTATGAGATGGGACGCAACCGCGTTGAAGCGTATGGCGCTCAGTTCTTCGGAAGCCTGTCATATGACTACCTGTCAAGCCACTACCGCCTGTCAAACGCGACTGACAAAGCGGCATGGTTTAACCTGGGTAAAATGATCGTCACTAACCAGAACGATGCAAGCCGTATCCGCTTCTTTGGTGCCAACGGTCAAGCGTCAGTGCCTTCAGATCAGGGCGCGTTTGATTCAAACAACTTTGGTGGCGGTGAATGCCTGCTGACTCTGCGCCGCGTGCCTGGAACGGGTACACGTCAGGATTGTGCGATTGAGGTTCACGGCAACTCGCCTATCGCCGATATCCGTATCAGCCGCCCATATGAAAACGACGTTGAAATTTACGTGCAGCTTAAGCCTCAGTGCGGCTTTGTTAACGTCAGCCTTGAGACCAGCACTAACTCACGCTTCGACAGCGGTACGCGCTTCCTGTGGACTTATAGCGGCGCTCCGGTGACTGATGATGCTATCGCAGGTATGACGCTGTATTCTCCGCGCAAAACTGTAGCATTTGGTACATTTGGCGCAGGCTTAACCATCATGGAAGATAAAACGCTGGGCTTCACTGGCCGCGATCTGATTGATGGCAAAATGCCATTCATGCACAACGGCAAGGTCTATTTGATGCCGCTGGTAGTTTCACCTGACGGATCTGATTCTTTCGCTCGTACTGGTGAGATCGACGGAACCAAAATTGATAACCTGCTGGGCGGCAACCTAAACCAGGGATGGGTTAACAGCTTTAAATCTGGCGCTGACGCTCAGAATGGCTCGCTTAACTTGAGCGTGAAGGCTGGCGCGGCGATCTCAGTAAATACCGCTATTGCGGATCTGGTTTCTGAATTGACGATTGTTTCTGGTCCGGCCAACACCGGCACGGCAATTAGCACGTCAGTAGACTTCAGGAAGCCCAACGGCGGGACCGGTCAGAACACGCTGCGCGTTGTGTTCGCTGGCAAGGTTGATGGCAAGAACACCATCCGCCTGGCTAAACGCGTGAGTGGTGTAACCACTACCATTAGCCCGCAGGACGGCTTTATTAATGATGGTCAGGTGCTTAAGATTTACACGAAAGGCAATGTTATCCGCGTTTACGCTGATGACGTGCTGATCTGGGATCTGACTGATGACCAACTGCTGACGGGTACTTATTTCGGATTCGGCACAGCAAGTACGAATGCCGGGATGATTGTTTCAAAGCTGAAGTTTTACAAAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7a6b43433f8f173bcacdf9ab8ef088e8f844c569e3444e28f4c3a9e19c84789
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7039
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50