Protein

View in Explore
Genbank accession
UUW39217.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTDCSKIPTLTLVEDSKRAMEDTVAFAGSPENTYTSELDGGVKKTITGVTKDALNAFRLGAGDPQGDYSIGVTYDEPNWTYTYNGQQWGLSKDFDLSTLPYTTTEVDPNNDINLAVRGDASQEYVQTEVTRGQGEVIRGVVFPFDDGVVSNGDEIPSGVRFIRVDINNQPTLVEMYPVSSGSVSLITDYGATIGTTPVSFLDIGEVHSTFSPLQSDAVLNSKIAADAVNAGKKIKLISDAYFEPLGSVVSNDVTFVGEKSPKMKFVGSGTMFKLQDGLSVYNSGLDYEVEVGESVKYFDYENPDGKLRIAWFADFKIDGSLQLVNPSTGLNLDPTVVDFGIDHIYIGPGNTKNMVDQMCLVNSTPYKTLKVEDVHGRNNKLLTISNPVQNFHPFYENIQKAMVSLEVNNVTLENDRGFFAEATGGTYAGIVLWEGYKASVKNTRCEGVVTSDGTPVYDFYMAGIDVETEGCVMKDCYAFNFDGNTGLKIKKVENCDAARKRAYFSDDFFDYWQTNHGLLLSNSGGNPWTIDLESIGGTYSIDNSELICPFSHSNGRQKATQELSKFSLTNSKIAVKSGVAPYFVTARWTPTLKDQDKFVVVRNNDFDIETDDAFYLAKMDINQGTPDGGFIDLSENTIRAKGGVYELLITTTDTDNKDTVLDFLKVGNKVYTEGNYQQVKNFCKLPTVKNTDFSNSQVQMNTTGNEIFYGVNPMGDGASTGDFKHVQKGTPGRVDAIAFHRPQSSKVSSGRILVNGHVQYDEVIRNFNTYIDITPNETNNTIDITIPVLAGGVQTITWSGSTGILTYLDLGYDINEPFVMIMRRNDDYVYFSFEYRSGSEPSYAALNWNYSAS
Physico‐chemical
properties
protein length:853 AA
molecular weight: 93940,41820 Da
isoelectric point:4,60199
aromaticity:0,10785
hydropathy:-0,33423

Domains

Domains [InterPro]
DC_2100
STR
188–785
DC_2100
Coil
Unmapped
395–415
Coil
UUW39217.1
1 853
Architecture
STR
STR 188-785 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UUW39217.1
1 853
Domain Start End Length (AA) Confidence
N-terminal 1 219 219 0,9944
Central domain 220 672 454 0,9715
C-terminal 673 853 180 0,8203
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-219
Central
220-672
C-terminal
673-853

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Artemius
[NCBI] 		2939261 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UUW39217.1 [NCBI]
Genbank nucleotide accession
ON366409.1 [NCBI]
CDS location
range 17596 -> 20157
strand +
CDS
ATGACAGACTGTTCAAAAATCCCAACCTTAACCCTGGTTGAAGATTCGAAAAGAGCAATGGAGGACACTGTAGCGTTTGCAGGTAGTCCTGAAAACACGTACACCAGTGAGTTAGATGGTGGTGTGAAAAAAACAATAACAGGTGTGACTAAAGATGCTCTGAACGCATTTCGCTTAGGAGCAGGTGATCCTCAAGGTGACTACTCTATTGGTGTCACTTACGATGAACCGAACTGGACCTACACTTACAACGGTCAGCAATGGGGTCTGAGTAAAGATTTCGACCTGTCTACACTACCATACACAACCACTGAGGTTGACCCGAATAACGACATAAACCTTGCTGTTCGTGGTGACGCTTCACAAGAATACGTCCAGACTGAAGTCACACGAGGTCAAGGTGAGGTTATCAGAGGTGTTGTCTTCCCGTTCGATGATGGTGTTGTGAGCAACGGTGACGAGATACCGTCTGGTGTCAGGTTCATTAGAGTCGACATCAACAATCAACCAACTCTGGTTGAAATGTACCCTGTTTCATCAGGCTCAGTGTCATTGATAACAGACTACGGAGCTACGATAGGGACAACACCTGTTAGTTTTCTCGATATTGGAGAGGTTCACTCAACATTTAGTCCTTTACAATCTGATGCTGTGTTGAACTCTAAAATAGCGGCTGATGCTGTAAATGCAGGTAAAAAAATAAAGTTAATATCCGATGCATATTTCGAACCACTAGGTTCTGTTGTGTCAAATGATGTGACTTTTGTCGGTGAAAAAAGCCCTAAGATGAAGTTTGTAGGTTCCGGAACAATGTTCAAACTTCAAGACGGACTATCTGTTTACAACAGCGGCCTCGATTACGAGGTTGAGGTTGGTGAATCCGTTAAGTACTTTGATTATGAGAATCCAGACGGCAAATTAAGAATCGCATGGTTTGCGGACTTCAAAATAGACGGGTCACTTCAACTTGTAAACCCTTCTACGGGGTTAAACTTAGACCCTACTGTTGTTGATTTCGGTATCGACCATATCTACATAGGTCCAGGTAACACCAAGAACATGGTTGATCAGATGTGCTTGGTAAACTCAACGCCATACAAGACATTAAAGGTCGAAGATGTTCATGGGAGAAACAATAAGCTACTGACCATCTCCAACCCTGTGCAAAACTTCCATCCTTTCTATGAAAATATACAAAAGGCCATGGTCAGCTTAGAGGTCAATAATGTAACACTAGAAAATGACCGTGGATTTTTTGCCGAGGCTACAGGTGGAACTTATGCAGGTATTGTGTTGTGGGAAGGATACAAAGCAAGTGTAAAGAACACTCGATGCGAAGGCGTGGTTACATCTGACGGTACACCAGTTTACGACTTTTACATGGCGGGTATTGATGTCGAAACGGAAGGGTGTGTAATGAAAGATTGTTACGCATTCAACTTTGACGGGAACACAGGTCTAAAAATTAAGAAAGTCGAGAACTGCGACGCAGCCCGTAAGCGTGCGTACTTTTCTGATGATTTCTTTGATTACTGGCAAACTAACCATGGGTTGTTGTTGAGTAATTCAGGTGGCAACCCGTGGACAATCGACTTGGAAAGTATTGGCGGTACATATTCAATTGATAATAGTGAACTTATTTGTCCTTTCTCCCACTCAAACGGACGACAAAAAGCAACACAAGAATTATCTAAGTTCTCATTAACTAATTCCAAGATCGCTGTTAAAAGTGGTGTTGCACCTTACTTCGTCACTGCAAGGTGGACTCCTACGCTGAAAGATCAAGATAAGTTTGTGGTTGTACGAAACAATGACTTTGACATAGAAACTGACGACGCGTTTTACCTTGCCAAGATGGATATAAATCAAGGCACCCCTGACGGCGGATTCATTGACTTGTCAGAGAATACAATCCGAGCCAAAGGAGGTGTTTACGAATTACTCATAACCACAACGGACACGGACAATAAGGATACTGTTTTAGACTTCCTTAAGGTCGGGAATAAAGTTTATACCGAGGGTAATTACCAGCAAGTCAAGAATTTCTGCAAATTACCAACTGTTAAGAACACTGACTTTTCAAATAGTCAGGTTCAAATGAATACGACAGGTAATGAGATATTCTATGGCGTGAACCCTATGGGTGATGGCGCTTCGACAGGTGACTTCAAACACGTTCAAAAAGGAACACCTGGTAGAGTCGATGCGATTGCGTTCCACCGACCTCAATCAAGCAAGGTGTCATCAGGTAGAATTCTGGTTAACGGTCACGTTCAATATGATGAGGTTATTAGGAATTTCAACACATACATTGACATTACACCGAACGAAACAAACAACACTATTGATATAACCATTCCAGTCCTTGCTGGTGGCGTTCAAACAATAACTTGGAGCGGTTCTACAGGCATCTTGACTTATCTTGACTTGGGGTATGACATTAACGAACCTTTCGTCATGATAATGCGAAGAAATGATGATTACGTTTACTTCTCTTTTGAGTATCGATCTGGCTCTGAACCTAGCTACGCTGCTTTAAATTGGAATTACTCAGCGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6907bb96815d65958f685247d5f299296bda637c77edb51f2baf6be0be36d241
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5320
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Vibrio Phage Artemius, a Novel Phage Infecting Vibrio alginolyticus Droubogiannis,S., Pavlidi,L., Tsertou,M.I., Kokkari,C., Skliros,D., Flemetakis,E. and Katharios,P. 2022 36014969 GenBank