Protein

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Genbank accession
AIZ02230.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTTTNTLKHISDKSEYKTFDPAGTSFPPEVTNVQEALGALAPIAIDGFIPESTVTVPGIIRLATEQEVIDGLGNNTAVTPETLKARLAIPTQATETYIGITRYATDAEAIAGTVSTAAIVPSSLKASIDDTFNTRTSTEDRNGVIKISTQPAALAGTDDTTAMTPLKVSLAIGAATAALPTYSTATTTVQGIVKIATPAEVQQGTMNDGVAVSPLGLKQLVSTQGQNGLIRLATPTEAAAGSNSNIALSPSTLLSRTGTTGRLGVVKLTTTVGSGDGNTALAYNANVISTGGGTINGTLNVNGTLRRNGQDVVTRNELKDSVPIGTIIMWGGQTGNIPSGWEICDGGNVGDAGFRNVVGGKWGATGNKPDFRGLFPRGSNSSNDGAMKEWETNINIRNAKGNDSKQKPKLGQGVGSYGHGTVQAQQLRFHKHAGGFGEHDNAGAFGNTVRSNYAGTRKGLDWDNRSYFTNEGYEIDGAGNRDSRTTLNSEGLIGNESRPWSMSILFIIKVR
Physico‐chemical
properties
protein length:511 AA
molecular weight: 53260,63370 Da
isoelectric point:6,55896
aromaticity:0,05284
hydropathy:-0,29726

Domains

Domains [InterPro]
DC_0176
STR
1–433
DC_0176
G3DSA:2.10.280.10
Unmapped
250–286
G3DSA:2.10.280.10 IPR037053 IPR044916
SSF69349
STR
250–334
SSF69349 IPR027448
IPR015173
STR
251–310
IPR015173 SSF88874
AIZ02230.1
1 511
Architecture
STR
ATT
STR
STR 1-310 | ATT 311-372 | STR 373-510 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_VR20
[NCBI] 		1567027 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gaprivervirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIZ02230.1 [NCBI]
Genbank nucleotide accession
KP007360 [NCBI]
CDS location
range 89197 -> 90732
strand +
CDS
ATGACAACGACTAACACGCTAAAACATATTAGCGATAAATCCGAATATAAAACATTTGACCCGGCGGGGACTTCATTCCCGCCAGAAGTAACAAACGTTCAAGAAGCATTAGGGGCTTTGGCTCCTATTGCTATCGATGGATTTATCCCAGAATCAACTGTTACGGTCCCAGGTATTATTCGTCTGGCAACTGAACAAGAAGTTATTGATGGTCTCGGTAATAATACCGCAGTAACTCCAGAAACTCTTAAAGCTCGTTTGGCTATTCCAACTCAGGCCACCGAAACATATATTGGTATTACCCGTTATGCAACCGATGCAGAAGCTATTGCCGGAACTGTTTCGACTGCTGCAATTGTTCCATCAAGCCTCAAGGCTTCTATCGATGATACATTTAATACTCGTACGTCTACAGAAGACCGCAACGGTGTAATTAAAATTTCAACACAACCGGCTGCACTAGCAGGAACAGACGATACAACAGCTATGACTCCTCTGAAGGTTTCATTAGCAATCGGTGCAGCAACTGCAGCTCTTCCAACTTATAGCACCGCAACAACCACCGTTCAGGGGATTGTTAAAATTGCAACTCCAGCTGAAGTCCAACAGGGAACAATGAATGATGGCGTTGCTGTTTCTCCATTGGGCTTGAAACAACTCGTTTCTACTCAGGGTCAAAATGGTCTTATTCGTCTGGCCACTCCGACCGAAGCCGCTGCAGGCAGTAACTCGAATATTGCATTATCTCCGTCCACTCTTTTATCGAGAACAGGTACAACTGGGCGCCTCGGGGTTGTTAAATTAACAACTACTGTTGGTTCTGGTGATGGTAATACAGCTCTTGCGTATAATGCAAATGTCATTTCAACTGGTGGTGGTACGATTAACGGAACTCTTAACGTTAACGGAACTTTACGCAGAAATGGTCAGGATGTCGTAACCCGCAACGAACTAAAAGATAGTGTACCAATCGGAACTATTATCATGTGGGGCGGTCAAACTGGTAATATTCCTTCTGGCTGGGAAATCTGTGATGGTGGCAACGTTGGTGATGCTGGTTTCCGAAATGTCGTTGGTGGTAAATGGGGTGCAACTGGTAACAAACCAGATTTTCGTGGCTTATTCCCGCGTGGTTCCAACAGCTCTAACGATGGTGCTATGAAGGAATGGGAAACAAACATTAATATAAGAAACGCCAAGGGAAATGATTCCAAACAAAAACCTAAATTGGGTCAAGGTGTTGGTTCATATGGTCACGGTACAGTACAGGCACAACAACTCCGTTTCCACAAGCACGCTGGTGGTTTTGGTGAACATGATAACGCTGGTGCATTTGGTAACACAGTTCGTTCAAACTATGCAGGCACTCGTAAAGGTTTGGACTGGGATAACCGTTCTTATTTTACGAACGAAGGCTATGAAATTGATGGTGCAGGTAACCGTGATTCCCGGACTACATTGAACAGCGAAGGTCTGATAGGTAATGAAAGCCGTCCGTGGTCCATGTCCATTCTTTTTATTATTAAGGTCAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
66e267c9f5404e7c4891904d813d249c3e59bf22b327f5e0659001d9f94068f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
VR bacteriophages - a small but diverse group of low-temperature viruses Kaliniene,L., Meskys,R., Simoliunas,E., Zajanckauskaite,A. and Truncaite,L. 2015-03-10 — GenBank