Protein

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Genbank accession
WDS60792.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARPFEGALNDLLQGVSQQIPRERVAGQCSAQVNMLSDPVTGIRRRPGSLFVSVHDFGPIGEGDALYTQYLERGADGRHLVINTNTGGWWLLDREAKNIVNEGNLSYLLAADRRSIQTTSMGGITYILNTEKRPSATTDNSDKKDPKTTGFYFVKSGAFSKEYDLSVVWSLGSQTVTYTTPDGTTAGDADQSVPEAIARKLVEKLIAVGVDFAVRVGPYIYFELITGTDLKITSTSGSPYVGYSNQSQVNLETDLPARLHPSADGALCAVGQSERALVWYRYSAEKGVWLESGDYNSVTAISVDVPYKIVDDNVEQHIMEGRLAGDDLTNPAPTFLEERRITGIGTFQGRLVLLSGAYVCMSATGEPDRFFRSTVSSLDPTDRIDIASGSAQNSVFRQALQFNKDLILLGDSTQAVVPSLQQLLAPDNASVVLTSDLACNAFVAPVTTSQTLMYPAPRSEAFSAVLELVPSQYTSSQYVSQDVTTHIPRYIEGEARFMQSASAANIVLMATTGDNRQVIAHEYHFTNQGKVHQAWHKWFFPYRVASLHFARDRVVLFAADDDGSTDKITISTIDPKQGGVTFDVDRLPHLDAMSRVPITTEGKGIVPIYMRPWVAEGKLTGAVATGARASEEVAIDVDEITWEFTVEPGSTHEEIYLGFRYESLFAPTPPMLKDQNDTLISTAPVRLLRYELTTRNTGEFDVRIVDPSIGLDYSDSTTSLVFGTDSVQPDMALLADLARVPVPCRSNAQSTEMYLSTDGTQDMNILEIEYIIRYNQRRRRV
Physico‐chemical
properties
protein length:781 AA
molecular weight: 85855,30770 Da
isoelectric point:4,91546
aromaticity:0,08579
hydropathy:-0,21895

Domains

Domains [InterPro]
DC_0058
STR
1–781
DC_0058
IPR058003
TTP
9–781
IPR058003
WDS60792.1
1 781
Architecture
STR
STR 1-781
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS60792.1
1 781
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9910
Central domain 142 340 200 0,0590
C-terminal 341 781 440 0,2098
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-781

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP9
[NCBI] 		3025410 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS60792.1 [NCBI]
Genbank nucleotide accession
OQ302138 [NCBI]
CDS location
range 3033 -> 5378
strand -
CDS
ATGGCTCGTCCATTTGAGGGTGCATTGAATGACCTGCTGCAAGGTGTGTCCCAACAGATTCCACGCGAACGTGTGGCAGGACAATGCTCTGCGCAAGTTAACATGCTGTCCGACCCAGTAACAGGTATCCGTCGTCGTCCCGGTAGCCTGTTCGTGAGTGTGCACGATTTTGGCCCGATTGGTGAGGGTGATGCACTGTACACGCAGTATCTCGAACGGGGTGCTGACGGACGACACTTAGTAATCAACACCAACACTGGTGGCTGGTGGCTCTTAGACCGAGAGGCTAAGAACATCGTGAACGAGGGCAACCTGTCGTACCTCCTAGCGGCTGACCGTCGTAGTATCCAGACTACCAGTATGGGGGGTATCACGTACATTCTGAACACTGAGAAGCGCCCGTCTGCAACGACTGACAACTCTGACAAGAAAGACCCGAAGACAACAGGCTTCTACTTCGTCAAGAGTGGTGCGTTCAGTAAAGAGTACGACCTGTCCGTTGTGTGGTCGCTCGGTAGCCAAACCGTGACGTACACCACACCAGACGGTACAACAGCAGGTGACGCAGACCAGTCTGTGCCAGAAGCAATTGCGCGTAAACTGGTCGAGAAGTTAATTGCTGTGGGTGTGGACTTCGCTGTACGTGTTGGCCCGTACATTTACTTTGAGTTAATCACAGGTACTGACCTTAAAATCACAAGTACATCTGGTTCACCTTACGTTGGCTACTCAAACCAATCACAGGTAAACCTAGAGACTGACCTCCCTGCGCGTCTGCACCCGTCTGCCGATGGTGCATTGTGTGCTGTGGGTCAATCAGAGCGTGCACTTGTGTGGTATCGTTACAGTGCCGAAAAGGGTGTGTGGTTGGAATCTGGTGACTACAACTCTGTGACCGCTATTAGCGTGGATGTGCCCTATAAGATTGTCGATGACAACGTGGAGCAACATATCATGGAGGGGCGTCTCGCAGGTGATGACTTAACTAACCCTGCACCGACATTCCTTGAAGAACGCCGCATCACTGGTATCGGTACGTTCCAAGGTCGCTTAGTGCTTCTATCTGGTGCGTACGTCTGTATGAGTGCCACTGGTGAACCAGACCGTTTCTTCCGCTCTACCGTGAGTTCCCTTGACCCAACAGACCGTATTGATATTGCATCTGGTTCTGCTCAGAACTCAGTGTTCCGCCAAGCGTTGCAGTTCAATAAGGACTTGATTCTGCTCGGTGACAGTACACAGGCGGTAGTACCATCCCTGCAACAGTTACTCGCGCCTGATAACGCAAGCGTGGTGTTGACCTCAGATTTGGCCTGTAATGCGTTTGTAGCACCTGTTACAACCTCACAGACCCTGATGTATCCTGCACCTCGAAGCGAAGCATTCAGTGCAGTTCTGGAGCTTGTACCCTCACAGTACACATCGTCGCAGTACGTATCTCAAGACGTTACGACGCATATCCCACGTTATATCGAGGGTGAGGCTCGTTTCATGCAGAGTGCGAGTGCTGCTAACATCGTGCTAATGGCAACCACGGGTGACAACCGTCAAGTGATTGCACACGAGTACCACTTCACCAACCAAGGTAAAGTTCACCAAGCGTGGCACAAATGGTTCTTCCCATACCGTGTCGCTAGTCTGCACTTTGCTCGTGACCGTGTTGTGTTGTTTGCCGCAGATGACGATGGTAGCACCGACAAAATCACTATCTCGACCATCGACCCTAAACAGGGTGGTGTGACGTTTGATGTTGACCGATTACCACACTTAGATGCAATGAGCCGTGTGCCTATTACAACTGAGGGTAAAGGTATCGTGCCAATCTATATGCGTCCTTGGGTAGCTGAGGGCAAGCTCACTGGTGCTGTGGCGACTGGTGCACGCGCCTCTGAGGAAGTGGCTATTGACGTAGACGAAATCACTTGGGAGTTCACTGTTGAGCCGGGTTCAACTCACGAAGAAATCTATCTAGGTTTCCGGTACGAGTCCCTGTTCGCACCTACACCCCCAATGCTGAAAGACCAGAACGATACCTTAATCAGTACCGCTCCGGTTCGTCTGTTGCGTTATGAGTTAACAACTCGAAATACTGGTGAGTTCGATGTACGTATCGTTGACCCAAGTATCGGATTGGATTACTCAGATAGCACAACTAGCCTTGTGTTTGGTACTGATAGCGTTCAGCCAGACATGGCGTTACTTGCTGACCTAGCACGTGTCCCTGTACCGTGCCGAAGCAATGCGCAGTCTACTGAAATGTACTTGAGTACTGACGGTACACAGGATATGAACATTCTGGAAATTGAATATATCATTCGTTACAACCAACGCCGACGTCGCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb842b391eea7bdada8a6f9949603d4892b5c3a69ceaad8fa61c5669f37b0c51
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2928
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50