Protein

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Genbank accession
YP_007673722.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSTDEMIEESPVEPHEQWAEKRIRARIEAERYEAENQGVTVNGIRYGGSESNRQALREAVELADDEGFTEFGAWKDSDGNYHTDHPVADVKDALRRIGVRRSALIGLESQYVSQAQSGQISTISDLDWTTQYD
Physico‐chemical
properties
protein length:133 AA
molecular weight: 15034,08290 Da
isoelectric point:4,55788
aromaticity:0,07519
hydropathy:-0,86917

Domains

Domains [InterPro]
DC_2197
STR
2–133
DC_2197
Coil
Unmapped
15–35
Coil
IPR025484
STR
21–115
IPR025484
YP_007673722.1
1 133
Architecture
STR
STR 2-133
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salicola phage CGphi29
[NCBI] 		754067 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salicola
[NCBI] 		332339 Bacteria > Proteobacteria > Gammaproteobacteria > Oceanospirillales > Halomonadaceae >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007673722.1 [NCBI]
Genbank nucleotide accession
NC_020844.1 [NCBI]
CDS location
range 30723 -> 31124
strand +
CDS
ATGAGCACAGACGAAATGATCGAGGAATCCCCGGTCGAACCCCACGAACAGTGGGCAGAAAAGCGAATCAGAGCCCGGATTGAGGCCGAGCGCTACGAAGCCGAAAATCAAGGGGTCACCGTCAACGGCATCCGCTACGGCGGCAGCGAGAGCAACCGCCAAGCCCTGCGCGAGGCAGTTGAGCTTGCGGATGATGAAGGCTTCACTGAGTTCGGAGCATGGAAAGACTCAGACGGCAACTATCACACCGACCACCCCGTCGCGGATGTCAAAGACGCACTCCGGCGCATCGGGGTCCGGCGATCAGCGCTGATCGGGCTTGAATCGCAGTACGTCAGCCAGGCACAGAGCGGGCAAATCAGCACGATCAGCGATCTGGACTGGACCACCCAGTACGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3f73914a947bc35466803edee30aed494ce205366e66fe64af00d6f10d7e16b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8332
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Salicola phage CGphi29 Henn,M.R., Dillon,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank