Protein

View in Explore
Genbank accession
YP_009902934.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKTRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSLKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTRNTPYTLTVSNKNLSAIRFRLLWPRVLKQKDNGDMVGSVVEYKIEMAVDGASYKTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVIVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRVMEVSGVQVFLAYRCDAKAGDTLILNTDDGKPVRRTIANVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPNKYDAIDNGVITDGRPTSVVDPDSMGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSALATATLTGKVGAPKGPINLFASDDEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNWYKARSVDRIGNVSEWTDYARGMSSTDVNIITDEILDEILDSDAMKELQESAQDSAAKLNDYANSIIQNALANDADVRVMRKENGKRKAEIAHTTVLIANESEARAAEITQLKAQIDEDITSQITILNEALADESETRATQIGKLQADFASEIDGVKTNMNAGFTQVNQAIANESEARASSEAALDAKIGQNSAALNQKLDSWANVNGVGSMYTMKLGLTYNGQEYNSGMALQLTARGGSVVSQVLFIADRFAIIRNAASGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNFQENVAGWRLDKNGVFVNYGSTSGEGSIKQTNQNITVRDGSGRVRCQLGRITGSW
Physico‐chemical
properties
protein length:1148 AA
molecular weight: 126812,52470 Da
isoelectric point:4,78103
aromaticity:0,09059
hydropathy:-0,30671

Domains

Domains [InterPro]
DC_0014
STR
1–1148
DC_0014
IPR053171
Unmapped
3–871
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–716
IPR036116
YP_009902934.1
1 1148
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1148
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009902934.1
1 1148
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,8852
Central domain 506 1009 505 0,0547
C-terminal 1010 1148 138 0,3728
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-505
Central
506-1009
C-terminal
1010-1148

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Sweeny
[NCBI] 		2580408 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus sweeny >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009902934.1 [NCBI]
Genbank nucleotide accession
NC_049839 [NCBI]
CDS location
range 25437 -> 28883
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCAAGACGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATCAAGTTATTGCTTGCTGTTTCGGATGGCGAGGTGGTTAACGACTTCAGCCTGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGCCCCGGCACGCAAACGCAGGACTACATCCAAGGCTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTCACTCGCAACACGCCTTATACGCTTACCGTATCGAACAAGAATCTTTCTGCCATTCGCTTTCGCCTGTTATGGCCCCGCGTTCTGAAGCAAAAAGATAACGGCGATATGGTCGGTTCAGTTGTTGAGTACAAGATCGAGATGGCTGTAGACGGCGCAAGTTATAAAACCTACCTAACGGGAAAAATTGACGGAAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTGCTTATCCGCGTGAGCCGGGTAACTCCGGACGCTGACGGGGTGAAGGTTGTCGATGCCTTCCAGGTTCAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGACCTGTTCCAAAATCAGATCCCTACTATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGTAATTACGATCCGATTAATCGCACATACTCCGGGACGTGGGACGGTGTTTTTAAGTGGGCGTGGAGCAATAACCCGGCATGGGTGCTTTATGACCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGCGAACTTGGCATCCCGGTTGACAAGTGGTCGCTGTATGAGGTGGCGCAATACTGTGATGAGCTTGTGCCGGACAATCGCGGCGGGATGGAACCGCGCTATTTGATGGATGTAATTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATGTTTGTTCAGCGTTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTTTCGATTATCGTCGATAAGCCGCGCGATCCGGTGTACCTGTTTACGGCTGATAACGTCGTTGACGGCGTTTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTACACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTATGAACAGGATGTTGAACCAGTGTTCAACCCGGATGCAGCCATGCGGTTCGGCCACAACCCGACCAGCATTACAGCGATCGGATGCACCAGAAGGACGGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACGAACCTAAGCGCCACAACCGTTTCGTTTTCTACTGGCCTGGAAGGTATGATTCCTTCTTGCGGCGATGTAATTTACGTTGCAGATCCGCACTGGCAATCGGCCTTTAACCTGGTGCTATCAGGCCGCGTTATGGAAGTATCTGGTGTGCAGGTGTTCCTGGCCTACCGCTGCGACGCGAAGGCTGGCGACACTCTGATCCTGAATACCGACGACGGAAAGCCAGTGCGCCGCACAATCGCCAACGTTTCGGCGGATGGTAAGACCCTCACGCTAAATGTTGGGTATAACTTTGACGTTGCGCCTGACAGTGTATTCCTGATTGAGAGCGATCAGCTTGCAGCGGAACAGTATGTAGTAACCCGGATTGAAAAGGGTAGTGATGACGATGAATTCACCTTTGCCATCACGGCTACGCAGTACGATCCGAACAAGTATGACGCGATCGACAATGGGGTAATTACCGATGGCCGACCAACTTCGGTTGTCGACCCGGATTCAATGGGCGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGGATGAGCGTCGAAACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGCAAGGATGGAGGTAACTGGAACAACGTTCCGCGCACTGCGACAACGCAGGTTGATATCGAAGGTATCTATGCTGGCGAGTATCAGGCCCGCGTGAGGTGCATTAGCGGCGGGAATGTAGCGTCTCCGTGGTCTGCGTTGGCAACTGCCACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCTGACGATGAGATCTTCGGCATTCGAGTTAAGTGGGCCATGCCGGAAGGAGCGGAAGATACGGCATACATTGAACTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACACTGATTCCTTACCCGGCGGCTGAATACTGGCATTCAATTTTGCCCGCTGGATATGTGAACTGGTACAAAGCCAGAAGCGTAGACCGTATCGGCAACGTTTCAGAATGGACTGATTACGCTCGCGGTATGTCTTCGACTGACGTTAACATCATCACGGATGAGATCCTGGATGAAATCCTGGACAGCGACGCGATGAAAGAACTTCAGGAGAGTGCGCAGGATAGCGCGGCAAAACTCAATGACTACGCGAACAGCATCATTCAAAACGCTTTGGCGAATGATGCGGACGTCAGGGTTATGCGCAAGGAGAACGGCAAGCGGAAGGCTGAGATCGCGCATACTACCGTGCTGATTGCGAATGAGTCTGAGGCGCGGGCGGCTGAAATTACGCAGCTTAAAGCGCAGATTGATGAAGATATCACGTCGCAGATCACGATCCTTAATGAAGCGCTGGCGGATGAGAGCGAGACGCGAGCGACGCAGATCGGCAAGTTGCAGGCAGATTTTGCGTCTGAGATTGACGGCGTAAAAACCAATATGAACGCTGGTTTTACACAGGTTAATCAGGCAATCGCAAATGAAAGCGAGGCGCGTGCAAGTTCCGAGGCGGCACTAGATGCCAAAATCGGGCAGAACTCCGCAGCGCTAAACCAGAAACTCGACTCGTGGGCAAACGTTAATGGCGTCGGTTCCATGTACACTATGAAGTTAGGCTTGACGTACAACGGACAGGAATACAATTCCGGGATGGCCCTACAGCTTACCGCAAGGGGTGGAAGCGTTGTTTCGCAGGTGCTGTTCATTGCTGATAGATTTGCTATCATCCGTAATGCGGCGTCGGGCGCGTACACGCTACCGTTTGTTGTGCAGAATGACCAGGTGTTCATGAATAACGCTCTTATTCAGGACGGTTCGATTACCAACGCGAAGATCGGCAACGTTATTCAGTCCAACAACTTTCAGGAGAATGTTGCAGGATGGAGGCTTGATAAAAACGGCGTATTTGTCAACTATGGTTCAACATCTGGCGAAGGTTCCATCAAGCAAACTAACCAGAACATCACGGTTCGAGATGGTAGCGGCCGCGTTCGTTGCCAGTTGGGTAGGATCACTGGATCATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
002f176788fd4874dde52647d33714a50d5571f1a8427047682e049887a8cb70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7717
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Klebsiella pneumoniae Phage Sweeny Martinez,N., Williams,E., Newkirk,H., Liu,M., Gill,J.J. and Ramsey,J. 2019 31558643 GenBank