Protein

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Genbank accession
WJJ59613.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
GSGTASIRYAAIKAKVEAALATPELVAAGKTKIDYLIWAQGEEDALTDTITVYRDKFKTLDTQFRSEAWMENHTPMFVMGMSGLHTRYQVWQGQLSYCENQNRNCIYVNSMGLKTQYDVSGTGDYTHWLGDSLWEHGYHRIWYALQERGITHRNQLAPFYGRGTGPWDGQPDAIAMFSSLVSIDSATSKFPTNSVAATGSITWGLNCAAAGNYTFAGGHTVTTDNTCNYSAAWGRSISLGPGAQYSASFGRENNVTGNHQFAVGRGHTTSSAGETCLGTFSFYASEQTNKVKLQVGVGSSSSVKKNAITAREDGAVEINVSSSHEPAQKGEMVIHAESNTSLRIKVRGTDGVVRSTVLTLA
Physico‐chemical
properties
protein length:361 AA
molecular weight: 39077,93820 Da
isoelectric point:6,89920
aromaticity:0,09695
hydropathy:-0,35097

Domains

Domains [InterPro]
IPR036514
STR
3–156
IPR036514 IPR011049
SSF52266
STR
8–152
SSF52266
IPR005181
ENZ
27–118
IPR005181 DC_0394
WJJ59613.1
1 361
Architecture
STR
RBD
STR
RBD
STR 3-156 | RBD 157-176 | STR 177-291 | RBD 292-361
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJJ59613.1
1 361
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,0581
Central domain 74 272 200 0,4110
C-terminal 273 361 88 0,9842
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-361

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ST59
[NCBI] 		3027704 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJJ59613.1 [NCBI]
Genbank nucleotide accession
OQ860966.1 [NCBI]
CDS location
range 1 -> 1086
strand +
CDS
GGTTCTGGCACTGCATCTATTCGTTACGCTGCAATCAAAGCTAAAGTAGAGGCTGCATTGGCTACACCTGAACTAGTGGCTGCTGGTAAAACTAAGATTGATTACCTGATTTGGGCGCAAGGGGAAGAAGATGCACTGACTGATACCATTACGGTTTACCGTGATAAGTTTAAAACCTTGGATACACAATTCCGTTCCGAAGCGTGGATGGAGAATCATACCCCAATGTTTGTGATGGGTATGTCTGGTCTTCATACTCGTTATCAGGTATGGCAAGGACAATTGAGTTACTGTGAGAACCAGAACCGTAACTGTATTTACGTTAACTCTATGGGACTAAAGACTCAGTATGACGTATCAGGTACAGGTGATTATACACACTGGTTGGGTGATTCACTGTGGGAGCATGGTTATCATCGTATCTGGTATGCACTCCAAGAACGAGGCATTACTCACCGTAACCAACTGGCTCCGTTCTATGGACGTGGTACTGGTCCGTGGGATGGGCAGCCTGATGCAATTGCTATGTTTAGTTCTCTGGTAAGTATTGACTCAGCAACATCTAAGTTTCCAACCAATAGTGTAGCTGCTACTGGTTCCATTACTTGGGGACTGAACTGTGCAGCAGCTGGTAACTACACCTTCGCAGGCGGTCATACTGTAACAACGGATAATACATGTAACTACTCTGCTGCATGGGGTAGGAGCATCTCACTGGGACCCGGTGCTCAGTATAGTGCAAGTTTCGGTAGGGAGAACAACGTAACTGGTAATCACCAGTTTGCAGTTGGTCGAGGCCACACTACCAGCAGTGCCGGTGAAACCTGTCTAGGTACTTTCTCTTTCTATGCGTCAGAGCAAACAAACAAGGTGAAGCTACAGGTTGGTGTTGGTTCTTCCTCTTCTGTTAAGAAGAATGCCATCACAGCAAGGGAAGATGGTGCGGTAGAGATTAATGTATCATCTAGCCATGAGCCAGCACAAAAAGGTGAAATGGTAATCCATGCGGAATCTAATACTTCGTTACGCATCAAAGTTCGTGGTACTGATGGTGTAGTTAGGTCTACTGTTTTAACGCTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34b45bcfe6ec3fe9256db7a6b4d7f6d7f31476a7bf04fbc1421862a0f977ca6f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50