Protein

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Genbank accession
YAS76689.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,96
Protein sequence
MVGFNSTSKFNKSRLQAALYAARKNRLGRLHSGGSNGGGGGPVIVPVVTIAGTPTVAEGGTLVYNINLDQATTVNISVGITYSGTAANGSFSGPSTVAVNAGQTSVNLQVATTDNTIVDGSRTVIATLADGAKYTVGASKTATGTISDNDTHPVANITNATAVTEGGNLVYVVTLNKATPNAIAIPIQYTGSAPSNNYSGPNVVNIAANASTGSLTVTTVDNAVVDGSRTVIATMQSGTGYTLGSTVAGSGTINDNDEVLRPVLFAGMNNVVHNNREARAYTNCMLRWDNIVGSGNLTHVGYVWNHYSLTASNNSFTPNGNDTTIVEAYAEYNNVTVRLTFNGANSRLVLSGESNVRCDLVPATAFGVSTIPRGGVVAVKFIAQNSAINQFLPASNRHVASGGQVRWYDPAVTTPSPISATGPWTSTGTAPDSRNNGWQPIMIGRYDSDVQVWIILGDSISAGTGDTAGTGRKSGLGWPGQALIDADGVSNPISFYNCAVHGSASIIATSNDALYDMYQYATRASVKYGTNDIGTAGTPGTPYATLISRLSTIYNNLKTKTGTRVTKIIALPLLPRTTSTDAWATTTNQTYQSTAGWAPSGVSEQVNQWIPTQVGVAVDYAGTWTFARDTSEPLKWKVNGNANYTTGDGTHPNSLTYTNMANEFRAARIAMDGAGN
Physico‐chemical
properties
protein length:676 AA
molecular weight: 70343,01300 Da
isoelectric point:7,68914
aromaticity:0,07396
hydropathy:-0,14763

Domains

Domains [InterPro]
IPR038081
ATT
50–150
IPR038081 IPR038081 IPR036514
IPR038081
ATT
53–150
IPR038081 IPR038081 IPR036514
DC_1250
STR
63–168
DC_1250 DC_1250 IPR013830
cd00229
ENZ
453–667
cd00229
SSF52266
STR
454–664
SSF52266
YAS76689.1
1 676
Architecture
ATT
STR
ATT 50-277 | STR 278-670 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAS76689.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,5946
Central domain 249 447 200 0,3410
C-terminal 448 676 228 0,6076
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-447
C-terminal
448-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage GJKY_A
[NCBI] 		3464432 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas citri
[NCBI] 		346 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAS76689.1 [NCBI]
Genbank nucleotide accession
PX310626 [NCBI]
CDS location
range 17878 -> 19908
strand +
CDS
ATGGTGGGTTTTAACTCAACTAGCAAATTCAATAAGAGCCGCCTACAAGCGGCTCTTTATGCTGCTAGAAAGAACAGGCTTGGCCGCTTACACAGTGGTGGAAGTAATGGCGGCGGTGGTGGACCGGTGATTGTGCCTGTCGTCACTATTGCCGGCACACCGACTGTCGCTGAAGGTGGCACTCTAGTTTATAACATCAATCTTGACCAAGCGACTACTGTTAACATTTCAGTAGGTATTACCTACTCTGGGACTGCTGCAAATGGTAGTTTTAGCGGACCTTCCACGGTCGCGGTTAATGCTGGTCAAACTTCTGTAAATCTGCAAGTGGCGACTACCGATAACACTATTGTGGATGGCAGTCGTACAGTTATTGCTACTCTTGCCGATGGAGCTAAATACACGGTAGGTGCCTCTAAGACCGCAACCGGTACTATTTCCGATAATGATACTCACCCTGTAGCAAATATTACCAATGCTACGGCGGTAACTGAAGGTGGAAATCTAGTTTATGTCGTCACTTTAAATAAAGCGACGCCTAATGCTATCGCAATTCCGATTCAATACACAGGTTCAGCGCCGAGCAATAACTACTCTGGCCCCAATGTAGTTAATATTGCAGCGAACGCATCGACTGGCTCACTTACTGTCACCACCGTGGACAACGCAGTAGTGGACGGTTCTCGCACTGTGATTGCCACAATGCAGTCTGGTACGGGATATACTTTGGGTTCTACGGTAGCAGGTAGCGGCACGATTAATGATAATGATGAAGTATTAAGACCTGTACTTTTCGCAGGCATGAATAACGTAGTTCATAACAACAGAGAAGCTCGCGCGTATACTAATTGCATGTTGCGATGGGATAATATTGTAGGTTCTGGCAATCTTACTCACGTAGGTTATGTTTGGAATCATTACTCCTTGACGGCTAGCAATAATTCATTTACCCCTAATGGAAACGATACTACAATTGTAGAAGCTTATGCGGAATATAACAACGTTACTGTGCGTTTGACGTTTAATGGAGCTAATAGTCGTTTAGTTTTGTCGGGCGAAAGTAATGTTCGTTGCGATTTAGTCCCAGCTACTGCATTTGGAGTTTCTACTATTCCTAGGGGCGGCGTAGTAGCTGTTAAATTTATTGCACAAAATAGCGCTATTAATCAATTTTTACCAGCATCTAATCGACATGTTGCTTCCGGTGGGCAAGTTCGTTGGTATGATCCAGCTGTCACTACACCTAGCCCTATTTCTGCAACAGGGCCTTGGACTAGCACAGGTACTGCTCCTGATTCTAGGAATAACGGTTGGCAACCTATTATGATTGGTCGCTATGATAGTGACGTACAAGTTTGGATTATTCTCGGAGATAGCATTAGCGCTGGCACTGGCGATACGGCAGGTACAGGTAGAAAATCTGGTTTGGGTTGGCCGGGGCAGGCTTTAATTGATGCCGATGGAGTTAGTAACCCTATTTCTTTTTACAACTGCGCTGTGCATGGCTCTGCTTCAATAATTGCAACGTCTAACGATGCGTTGTACGACATGTATCAATACGCAACTAGAGCTAGTGTAAAATATGGCACTAACGATATTGGCACAGCAGGTACTCCTGGGACACCATATGCCACTTTGATTTCTAGATTGAGCACGATCTATAATAATCTTAAAACTAAAACTGGTACAAGGGTTACTAAAATTATAGCGTTGCCTTTACTGCCTCGTACTACAAGTACGGACGCTTGGGCAACAACTACAAATCAAACTTATCAAAGTACGGCAGGTTGGGCACCTAGTGGCGTTTCTGAGCAAGTTAATCAATGGATTCCTACGCAAGTTGGAGTAGCTGTAGATTATGCGGGGACTTGGACTTTTGCGAGAGACACGAGCGAACCTCTCAAATGGAAAGTTAATGGTAATGCAAACTATACCACCGGGGACGGCACACACCCTAACAGTTTGACATACACCAATATGGCAAATGAATTTAGAGCTGCAAGGATTGCAATGGACGGCGCTGGTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a1349a1c7c8569d7d6918303787d9ab6159308dad284215630fe9f4e8fda08b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8675
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50