Protein

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Genbank accession
UGO54079.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEKGHDMPVSPMKFTKISDLPKKEVMENDQFIINTNDTKLDQTSVASLYDIREGVYFSNAANTIAEGLASVDDNEMFFVYDTAAKFSVLQYMRVRNQASPVIGSDGKQRRFPTYLSMLNVTAISETSGYDIIGKVDNFSALRSIKPTYTGQRVILAGYFSGSSLGSGEFVGYAGTANDDGGTTASGDGFYWKRNKTAFTLEDFGGGQVDDTEAMRASQKAQVGPITLSPGKTYYYSSPVKHYSKAGWIGNGASIVFRGTGNRIPFISSPTTAAGVDNDRANGSTAVTGAIFKDLTIDVNYVDTTGALGFEFGENTLDNWTNCVFTNVTFKNGKFDNLGLQNNSTDNQFIRCTFINAGEDSVTVRGGCLRNEFVECDVVNSAQVAHRDGTFYGDGIVNKGRDTLIKSCRFINIGNGKKGAGIANNAEDTKNADEASNGTYLNNYFINCYGGFGFGTVNPDFIAAGDLIKGIKAIGNVFVNTLRTVIGIRDLYQPVLLDNVILTQTTGNVTTIEITNCTNFQMTGRVTDAAGSAITITSSSGKVDLVADNVSTTKTLNGVVITDSNRITGSIRLINAQRRGCTFSNCNNMDLDLYVESPAQDALEAVGCRYSNLDVKLVNVPEHGMTLNGVVESNIKFNINDAGVKTPSAFYPIRLLGVRNSILSGVSSSANANKPLYDITSDANNVNVLIANSRLGAGTTGKVQVGQGSTITQNNII
Physico‐chemical
properties
protein length:716 AA
molecular weight: 76798,83920 Da
isoelectric point:5,34840
aromaticity:0,08659
hydropathy:-0,20112

Domains

Domains [InterPro]
DC_1164
ATT
11–130
DC_1164 IPR012334 DC_1084
DC_0717
ATT
106–232
DC_0717 IPR006626 IPR006626 IPR006626 IPR006626
IPR011050
STR
204–538
IPR011050
IPR012334
STR
215–523
IPR012334
UGO54079.1
1 716
Architecture
ATT
STR
RBD
ATT 11-232 | STR 233-538 | RBD 539-716
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGO54079.1
1 716
Domain Start End Length (AA) Confidence
N-terminal 1 211 211 0,9949
Central domain 212 705 495 0,9970
C-terminal 706 716 10 0,3122
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-211
Central
212-705
C-terminal
706-716

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM_Haymo
[NCBI] 		2902685 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGO54079.1 [NCBI]
Genbank nucleotide accession
OL539468.1 [NCBI]
CDS location
range 110350 -> 112500
strand +
CDS
TTGGAAAAGGGCCATGACATGCCAGTCTCCCCAATGAAATTTACTAAGATCTCCGACTTACCTAAAAAGGAAGTTATGGAGAACGATCAGTTTATCATCAATACCAACGACACTAAGTTGGATCAAACTAGCGTAGCTTCTCTCTACGATATTCGTGAGGGTGTCTACTTCAGTAACGCAGCTAACACTATCGCCGAAGGTTTAGCTTCCGTAGACGATAACGAGATGTTCTTTGTTTACGACACCGCGGCTAAGTTCTCCGTTCTTCAGTACATGAGAGTTCGTAACCAGGCATCGCCCGTCATTGGTTCCGATGGCAAACAACGCCGCTTCCCTACTTATCTTTCCATGCTGAACGTAACTGCTATCTCTGAGACGTCCGGTTACGATATCATTGGTAAGGTTGACAATTTCTCCGCGCTGCGTTCTATCAAACCTACCTACACAGGCCAACGTGTTATCCTGGCTGGGTATTTCTCTGGTAGCTCTTTGGGATCCGGGGAATTTGTGGGGTACGCAGGGACAGCTAACGATGATGGCGGTACTACTGCCTCAGGTGATGGCTTTTATTGGAAGCGGAACAAGACTGCCTTTACGCTCGAAGATTTCGGTGGCGGTCAAGTAGACGATACTGAAGCAATGCGTGCATCTCAGAAAGCACAAGTAGGCCCTATTACCCTCTCCCCAGGTAAAACCTATTATTACTCATCCCCGGTAAAACATTATTCTAAAGCCGGCTGGATTGGTAACGGTGCTTCTATCGTATTCAGAGGGACAGGTAACCGAATTCCGTTTATCTCTTCTCCGACTACAGCCGCTGGCGTTGATAACGACCGCGCAAACGGAAGTACTGCCGTAACTGGAGCTATCTTTAAAGACCTGACTATTGACGTCAACTATGTCGATACTACGGGTGCATTAGGCTTTGAGTTTGGCGAGAACACGTTAGACAACTGGACGAATTGCGTCTTTACTAACGTGACATTCAAGAACGGTAAGTTCGATAACTTGGGGCTGCAGAATAACTCCACCGATAACCAGTTTATCCGCTGTACTTTCATTAACGCAGGTGAAGACTCGGTTACTGTACGCGGCGGTTGTCTCCGTAATGAGTTTGTTGAATGTGATGTTGTCAATAGCGCCCAGGTAGCTCACCGAGACGGAACCTTCTACGGAGACGGTATCGTCAACAAAGGTCGTGATACCTTGATCAAAAGCTGTCGCTTCATCAATATCGGTAATGGTAAGAAAGGCGCGGGTATTGCGAATAACGCTGAAGATACCAAGAACGCTGACGAAGCTAGTAACGGTACTTACCTCAACAACTATTTCATTAACTGTTATGGCGGTTTTGGTTTCGGTACGGTTAACCCAGACTTCATCGCAGCAGGTGATTTGATTAAAGGTATCAAGGCTATCGGAAACGTATTTGTAAATACGCTTCGCACCGTGATAGGTATTCGTGATCTTTACCAACCGGTTCTGTTGGATAACGTTATCCTTACCCAGACCACCGGTAACGTAACCACGATTGAGATTACCAACTGCACCAACTTCCAAATGACCGGTCGTGTTACAGATGCCGCTGGCTCCGCTATTACGATTACGTCTTCCTCGGGTAAAGTTGATTTGGTGGCGGATAATGTCTCCACGACCAAGACACTCAACGGGGTGGTTATTACCGACAGTAATCGGATTACGGGCAGTATCCGTTTGATCAATGCTCAACGCCGCGGCTGTACTTTCTCTAACTGTAACAACATGGACTTAGACCTCTACGTTGAGTCGCCTGCACAGGACGCGCTGGAAGCAGTTGGCTGTCGTTACTCTAACTTAGATGTTAAGTTGGTGAACGTCCCTGAACACGGTATGACATTGAACGGCGTTGTTGAAAGTAATATCAAGTTCAACATCAATGATGCAGGAGTTAAAACTCCATCTGCATTTTATCCGATCCGGTTACTGGGTGTACGTAACAGTATCCTCAGCGGGGTATCGTCTTCGGCTAATGCGAATAAACCACTTTACGATATTACATCCGATGCTAATAACGTAAACGTATTAATCGCCAATAGTCGTCTTGGAGCGGGTACTACGGGTAAAGTACAGGTTGGTCAAGGGTCTACTATTACCCAGAACAATATCATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d610c7a5d7c8a8b074d746f63b4a6993c7f262ead06ddccfbddf3d580f4b17a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8352
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50