Protein

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Genbank accession
QGZ18362.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGIGSAFKKAAGIVLKPVTKIFGMNPLLSLGVSLFLSWILRPKVPEIEDFGTNEFDDFERGILLNKQSNDANIPVVYGERLIGGTRVFMETSGTDNTYLYMAIVMSEGEINSIEEIRVDDKVVTFASAFSDGTAVEVGSGDSNFYKDSESLIRVEPHFGTDSQSASTLLSTLSSWGSNHRLRGLCYLAIRFKWNQDAFTGIPKVQAKIKGKKVVAYNSSLVAQTAAHSTNPAWCLLDYLTNERYGKGISTTEIDLQSFYDASVICETQVEPYSGASNINIFDTNVALDTSQKIIDNVREILKGCRGYLPYTEGKYKLIIETTGTASITLTEDDIIGGYNLSIPTKNERYNRVIVGFVNPERNFQVDEIQWPPTSDSGLPSSDQHATMKTADGGFLLEGRFTFKTITSPYQAEEMAEIILRRSREALTLGLTVSFDAYDLAIGDIVGITHSSLGFSNKLFRCVGITFNEDYTIGLALVEYQASHYTWATKTQVASTPSTNLPNPFTVQPPASVSLDDTLIEYNDGTVIVALDVTIGASPDSFIDYYQVEYKKSTDSDFIIYAQGSGLTHRVLNVIDQQTYDVRVKAVNTLGVSSSYVSAQRTIVGAIEPPSDVTDFSCNILGQEAHLGWEQIPDLDLAYYNLRFSEATDGTADWQNSVALVEKVSRPATSISVPARAGTYLIKAVDKLGNFSSNATAVISNVTSALNFNAVATQSEHPDFAGTNTNTVITDNAIELDSSELFDAASGNFDDETTRFFDSGVANADFLSSGNYEFANVIDIGAKHTARITASLTQTADNPDDLFDNRSGLFDSASSNFDGDVAANCNAHIEIATSDDNVSYTAFRTFVIGEYTARYFKFRVVLISRDNASTPVVSEVTVTVDMQDRIFSGNDIVSGTGTKSITFTNPFKSVNYAVGVTGQGMATGDYFTVSNKTINGFDVAFFNSSDTGVSKTFDFIAKGF
Physico‐chemical
properties
protein length:959 AA
molecular weight: 104442,93960 Da
isoelectric point:4,58761
aromaticity:0,10323
hydropathy:-0,12127

Domains

Domains [InterPro]
DC_0187
STR
2–949
DC_0187
IPR053171
Unmapped
456–694
IPR053171
IPR013783
STR
485–602
IPR013783 IPR013783
IPR003961
STR
508–609
IPR003961
IPR036116
STR
509–612
IPR036116
IPR003961
STR
536–592
IPR003961
QGZ18362.1
1 959
Architecture
STR
STR 2-949 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC202P
[NCBI] 		2686464 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18362.1 [NCBI]
Genbank nucleotide accession
MN698248.1 [NCBI]
CDS location
range 21672 -> 24551
strand +
CDS
ATGGGTATAGGTAGTGCATTTAAAAAAGCGGCTGGTATAGTTTTAAAGCCTGTAACTAAAATATTCGGAATGAATCCTCTTTTATCATTAGGGGTATCATTATTTTTATCATGGATTTTAAGACCAAAAGTTCCTGAAATAGAAGATTTTGGAACAAATGAATTTGATGATTTTGAACGAGGTATATTATTAAATAAACAATCAAATGACGCAAATATTCCTGTAGTTTATGGAGAAAGACTTATTGGTGGAACGAGAGTGTTTATGGAAACATCAGGCACAGATAATACTTATCTCTATATGGCTATAGTCATGTCAGAGGGAGAAATAAATTCTATTGAAGAAATAAGAGTTGATGACAAAGTAGTTACATTTGCATCTGCATTTTCAGATGGCACAGCAGTAGAAGTTGGAAGTGGAGATAGTAATTTTTATAAAGATTCAGAAAGTTTAATTAGAGTAGAACCACACTTCGGTACAGATAGTCAATCAGCATCTACTCTATTATCTACATTATCATCTTGGGGAAGTAATCATAGATTAAGAGGTTTATGTTATCTTGCAATTCGTTTTAAATGGAATCAAGACGCATTTACAGGAATACCAAAAGTACAAGCAAAGATAAAAGGTAAAAAAGTAGTAGCATATAATTCAAGTTTAGTTGCACAAACTGCGGCTCACTCTACTAACCCAGCGTGGTGTTTATTAGATTATTTAACAAATGAAAGATATGGTAAAGGAATATCTACAACTGAAATAGATTTACAATCTTTTTATGATGCTTCTGTAATTTGTGAAACACAAGTAGAACCATATTCAGGTGCAAGTAATATTAATATTTTTGATACTAATGTTGCACTAGATACATCACAAAAAATTATTGATAATGTTAGAGAAATATTAAAAGGTTGCAGAGGTTATCTTCCATACACAGAGGGTAAGTATAAATTAATTATTGAAACAACAGGAACAGCGTCAATTACATTAACAGAAGATGATATTATTGGTGGATATAATTTATCTATTCCAACAAAGAATGAAAGATACAATAGAGTTATAGTTGGTTTTGTAAATCCTGAACGTAATTTTCAGGTCGATGAAATTCAATGGCCACCTACTAGCGATTCAGGATTACCAAGTTCAGATCAACACGCAACTATGAAAACGGCAGATGGGGGGTTCTTGCTAGAGGGAAGATTTACATTTAAAACAATTACATCTCCATATCAAGCAGAGGAGATGGCTGAAATTATACTTAGACGTAGTCGTGAGGCACTTACTTTAGGATTAACTGTTAGCTTTGATGCTTATGATTTAGCAATAGGAGATATAGTAGGAATTACCCATAGTAGCTTGGGCTTCTCGAATAAATTATTTAGATGTGTAGGAATTACATTTAATGAAGATTACACAATAGGTTTAGCATTAGTAGAATATCAAGCATCACATTATACTTGGGCTACTAAAACTCAAGTTGCTAGTACACCATCAACTAATCTTCCAAATCCATTTACTGTTCAACCACCAGCAAGTGTTTCATTAGATGATACTTTAATTGAATATAATGATGGAACTGTTATTGTTGCTTTAGATGTAACGATAGGTGCTTCTCCTGATAGCTTTATTGATTATTACCAAGTAGAATACAAAAAAAGTACAGATTCAGATTTTATTATTTATGCTCAAGGAAGTGGATTAACACACAGAGTTTTAAATGTAATTGACCAACAAACTTATGATGTTAGAGTAAAAGCTGTAAATACATTAGGAGTATCTTCAAGTTATGTATCTGCACAAAGAACAATCGTAGGTGCTATTGAGCCACCATCTGACGTAACAGATTTTTCATGTAATATTTTAGGACAAGAAGCACATCTAGGTTGGGAACAAATACCTGATTTAGATTTAGCATATTATAATTTAAGATTTTCTGAAGCTACAGATGGAACTGCTGATTGGCAGAACTCAGTTGCATTAGTTGAAAAAGTATCAAGACCAGCAACATCAATATCAGTACCAGCTAGGGCTGGAACATATTTGATAAAAGCAGTAGATAAATTAGGAAACTTTAGTTCTAATGCTACAGCAGTAATATCAAATGTTACAAGTGCTTTAAATTTTAATGCTGTTGCAACACAATCAGAACACCCAGATTTTGCTGGAACTAATACAAATACAGTTATTACAGATAATGCTATTGAGTTAGATTCTTCAGAACTTTTTGATGCGGCTAGTGGAAACTTTGATGATGAAACAACAAGATTCTTTGATTCTGGTGTTGCTAATGCTGACTTCTTATCATCAGGTAATTATGAATTTGCAAATGTTATTGATATTGGTGCTAAACATACTGCTAGAATTACAGCTTCATTAACTCAAACAGCAGATAACCCTGATGACTTGTTTGACAATAGATCAGGATTATTTGATTCTGCTTCTTCTAACTTTGATGGAGACGTTGCCGCTAACTGTAATGCACATATAGAAATTGCAACTTCTGATGACAATGTTTCTTATACAGCTTTTAGAACATTTGTTATTGGAGAATATACTGCTAGATATTTTAAATTCAGAGTAGTTTTAATTTCTAGGGATAATGCTTCTACTCCTGTAGTTTCAGAAGTAACAGTAACAGTTGATATGCAAGATAGAATATTTAGTGGAAATGACATTGTTTCTGGTACAGGAACTAAATCAATCACATTTACAAATCCATTTAAAAGTGTTAATTATGCTGTGGGTGTTACAGGACAAGGAATGGCAACAGGAGATTATTTTACTGTTTCTAACAAAACAATTAATGGTTTTGACGTTGCATTTTTCAACAGTTCAGATACAGGAGTTTCAAAAACTTTTGATTTTATTGCAAAAGGATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6152435f5d99d865e27e740d36309e13e1e6de7f6ce42e2c87e41d75ed69f3d9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8464
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank