Protein

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Genbank accession
UQS93042.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAVARHFGVKQSEVVYAKSGQSLSGYKVIYDKVSQRAYALPSNIGTVTVTSLVDGILTHSGGTVDLGALAVLREEYVTLVENFTSGFTIRVKNEVVSDGVNLYRWAGSLPKTVNAGETVDSAGGVNNDTWVVLGKPDINICSDISVLRTTEPSYIGQHITVLGYYSDSPGLGGGTFMAFASSEADDGVNIFVTAGGKRWKRTGSYIDIPVENGGMMTSRTAEQNSDALERLHACLPQTGGKLRFSGFYDIKYGAIRPPRVMWEGVGRDSCGLRKTGNDIKTVPDRIWQGAPHSFSLDFIAAIDMDSSVAGDLTGNFSRSGGITGMSLIGAATAKNAYGIYSSISYMVRLEDLYIEHVMTGYRTSDSWLQAFDSLLIKDVQDGISVDTGGTTFNLNNVYVRNVSRWAYKFTNITYSTLKGCAADYVTGSAYVFLGCTSVVMDGCGAEEVHGSFFECNQSRIAINGFRGVNLVDTGVVACIFTQCGVTITASYLPEFSGSHTSKYWQVGDTTINLDNTVAPDASRVLWGAATSWLNFSHYNGNYTIWGTVTWTATGYLINGIAHVYGGNPPDASVTQFGTGARWELAIPVAGQPYKWIHMGSGVWKVAGSVAA
Physico‐chemical
properties
protein length:630 AA
molecular weight: 67616,13680 Da
isoelectric point:5,90923
aromaticity:0,10635
hydropathy:-0,04302

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
DC_0071
STR
1–628
DC_0071
IPR040775
RBD
91–153
IPR040775
UQS93042.1
1 630
Architecture
ATT
STR
ATT 1-151 | STR 152-628 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UQS93042.1
1 630
Domain Start End Length (AA) Confidence
N-terminal 1 238 238 0,9924
Central domain 239 552 315 0,9824
C-terminal 553 630 77 0,8876
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-238
Central
239-552
C-terminal
553-630

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BRM 13313
[NCBI] 		2654655 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica
[NCBI] 		59201 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UQS93042.1 [NCBI]
Genbank nucleotide accession
ON169962.1 [NCBI]
CDS location
range 88992 -> 90884
strand +
CDS
ATGAACGAAATGTTTAGTCAAGGTGGTAAAGGTTCGACTGGAATCTTAACCAATAAACAAGCAGTAGCCAGACACTTTGGTGTTAAACAATCTGAGGTTGTTTATGCCAAATCAGGACAGTCCTTGTCTGGTTATAAAGTGATCTACGATAAGGTATCTCAACGTGCCTACGCTCTCCCTTCTAACATTGGTACTGTAACGGTCACTAGTTTAGTCGACGGCATTCTCACGCACTCTGGAGGCACCGTAGATTTGGGTGCATTGGCTGTGTTAAGGGAAGAGTATGTTACTCTTGTTGAAAATTTTACTTCTGGATTTACGATTCGTGTCAAAAACGAAGTTGTGAGTGATGGGGTAAATTTGTATCGGTGGGCTGGTTCTTTACCAAAAACTGTTAATGCAGGTGAAACCGTCGATAGTGCTGGTGGTGTAAATAATGATACTTGGGTAGTTTTGGGTAAACCAGATATCAATATTTGCTCAGATATTTCTGTTCTACGAACAACTGAACCTTCATATATTGGTCAACATATAACAGTCCTTGGGTATTATTCCGATTCTCCGGGTCTTGGTGGAGGAACATTTATGGCGTTTGCCAGTTCCGAAGCTGACGATGGAGTTAATATCTTTGTAACGGCAGGAGGAAAACGCTGGAAGCGAACGGGAAGCTACATAGATATTCCGGTTGAGAATGGTGGCATGATGACCTCCAGAACGGCCGAACAAAACAGCGATGCTCTTGAAAGGCTTCATGCTTGTCTTCCTCAAACTGGGGGTAAGTTACGCTTCTCAGGTTTCTACGATATTAAGTACGGAGCAATTCGCCCGCCACGAGTTATGTGGGAGGGGGTGGGTAGAGATTCTTGCGGCCTTCGCAAAACAGGTAACGACATTAAAACCGTTCCAGATCGCATATGGCAAGGCGCACCGCATAGTTTCTCCCTTGACTTTATTGCTGCCATTGATATGGATAGTAGCGTTGCAGGGGATCTGACTGGTAACTTTAGTCGTTCCGGAGGAATAACTGGGATGAGCCTGATTGGCGCTGCTACTGCAAAAAATGCCTATGGTATTTATAGCTCTATCAGTTATATGGTTCGATTGGAGGATTTGTATATTGAGCATGTTATGACTGGCTACAGAACTAGTGACAGTTGGCTTCAGGCGTTTGATTCACTTCTCATCAAAGATGTTCAAGATGGCATCTCTGTAGATACTGGTGGTACAACTTTTAACTTAAATAATGTTTATGTCAGGAATGTATCCCGTTGGGCATATAAGTTTACTAACATTACTTATTCCACTCTTAAAGGTTGTGCAGCGGATTATGTAACTGGTTCCGCTTATGTATTCTTAGGTTGCACTAGTGTAGTGATGGACGGATGTGGAGCAGAAGAGGTTCACGGTAGCTTCTTTGAGTGTAATCAATCTCGTATAGCTATTAATGGATTCCGTGGTGTTAACCTTGTGGATACTGGTGTGGTTGCATGCATCTTTACACAGTGTGGCGTTACAATCACGGCAAGTTACTTACCAGAGTTCTCTGGCTCGCATACTAGCAAATACTGGCAGGTTGGTGACACTACTATTAATCTCGATAACACAGTGGCTCCTGACGCATCTAGAGTTCTTTGGGGGGCAGCAACATCATGGTTAAACTTCTCACACTATAATGGTAATTATACCATCTGGGGGACAGTTACCTGGACTGCAACCGGCTACCTCATTAATGGTATTGCACATGTCTATGGGGGAAACCCTCCTGATGCTTCTGTTACTCAGTTCGGTACGGGTGCAAGATGGGAGCTAGCTATTCCTGTTGCTGGGCAACCATATAAATGGATTCACATGGGTTCTGGTGTGTGGAAAGTTGCTGGATCTGTAGCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f2ef4bbd648408c2f0c881ec0a33311529aabc400eb09f69a0d52069165e1028
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8090
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization, comparative genomic analysis and efficiency of wild-type bacteriophages on the reduction of Salmonella Heidelberg colonization in broiler chickens Vaz,C.S.L., da Fonseca,F.N., Voss-Rech,D., Mores,M.A.Z. and Coldebella,A. 2024-05 — GenBank