Protein

View in Explore
Genbank accession
NP_858969.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MASNLVVTPHPLTLDGQTHIPAQLLPGQSLYSFLAANAPDSLDGGWAVTIGGRQVPVEMWTKTFPKDGHLIEVRSTVDNKQAFQLIALLVLTYFTFGIGSAAAGAWTVAGAYGAVAATAVYVAGSVIINKVLGPKPPKTPAAEESGGVYSLNGATNSSRPYQALGIPFGAIDIAPDLLSKPYSYFDGDDQYLALLLTPGINVARVDNVRNGDNPFSNYPGSQLFSSGMSGMPQQAIPLFTDVDSQAGGALQDEDKNPAVVVRTTPPDTVRIQVDIEYTLFGKGKKGNALYNEGTVTAEYRTAGSGSWLNLETRYVTNKDMRVHRMSLKKDVPPGQYDVRVTRSVMSLTGDNDVAQFNFTSLTSVQRDTAQYLGISRVGIIFKATGQLSGTPNEIKMRVTAKPVQTWTGTQWRIADTVDNGLSNPGAQMLAYIRGYYDEAGNLIGGMGLSDMFIDIPAFQAFILHCEANDYKYNYYLRDSRTHSEVLESIALVGFGQVTNATGKISVAWAGANQPVTAVVGMGTIRQGQFGVDYTLSNTADGVELSYFDADIGDTSVVRVASPGVTTALNPARIQAEGITTAKHAAEMARYHLGQSLYQAKDITFGADIEHITYRRLSVLSLSHDLTQWGYSGRLMAAAKVSGVVTLFLDTEVPPPSAGNAYVGVRIPGELSYRVMQVRPFSSPSKSIQLVGAWPIDAAFPGEASDNPAWDTTYCYDFKASPGYTVRVVGITPDADLKGAQVSVVPESAEFWNYVKTGTYIPAPNGSGLNTRPTVSGLKIVEAQVVQGNTVFTELSATWEVSGPYARADVLMAEGSGDSLLQTTSTTRSATWRIPGAGVYTVTVRPFNPDGLAGYAQSIVFATKGADAPPVNPDIFDVQQVSGGLRRYVWGFGSDTIQSADYAGVEIRYTSGSVQSPVWETMLPVAGDDGSGFHTAPFESPTPVSGTYTFSLRAVNTSGRLSDQTLTIVRALGKNLGELLDQINNDVSKAIVDAFQRDEAEARARVDAINAVITQVQDEATARATAVQQVTTALNQSIADQTAALLNEQLDRQAAIQTANQLRQSGDESLAYQISQISAGTGMQFDGIKTWYFDTTSEGWNGTAASGYLNPGDVYATSPTGLGVNGSAYRYVRMRIKRVGTPVWSGQLGWRSAGGTWSSLALSAPTFDANGVATVDANDIPWADTTVDQIRVKLSDTVTSSNYYLFDWVAIGRPTPGASVALVEDVRQANATALAAEAQQRNTLAVQLRGNYTGNDLDGLTSGLVYQERTARVTETSAISTRVDGMQVSLDGKASASALQTLSTKVETIDDRVTSASESVFALEAQLDGHTAGETGWTAGDTSVHVGARTVYSVIAESDLALARRVDTVSSDLGQFKGSATQQLQTLSTAQDAQAQLYQQVSASLDTKASTSSVNLLTTRVTEAEGNITANSQNIAQAQAAIANKADASAVSALQTTVNTIDGRTTANANSITAVQAAVDGKAAASTVLELTATVNSQGSTLTSINSQAFLALNSNNYIGGFKIGNNGQVVDFTVLADNFRIVAPAGGARLEYSAGTLRVYDNNNVLRVELGKLS
Physico‐chemical
properties
protein length:1574 AA
molecular weight: 167084,20360 Da
isoelectric point:4,94797
aromaticity:0,08005
hydropathy:-0,12745

Domains

Domains [InterPro]
DC_0129
STR
1–1103
DC_0129 DC_0793
IPR055385
ATT
258–365
IPR055385 DC_1268
NP_858969.1
1 1574
Architecture
STR
ATT
STR
STR
STR 1-257 | ATT 258-365 | STR 366-1103 | STR 1148-1570 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xp10
[NCBI] 		2907956 Uroviricota > Caudoviricetes > Xipdecavirus >
Host Xanthomonas oryzae
[NCBI] 		347 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_858969.1 [NCBI]
Genbank nucleotide accession
NC_004902.1 [NCBI]
CDS location
range 14553 -> 19277
strand +
CDS
ATGGCATCAAACTTAGTAGTTACCCCGCATCCACTAACATTGGACGGGCAGACACACATCCCGGCACAGCTTTTGCCTGGCCAATCGTTGTATAGCTTCTTGGCAGCAAATGCCCCTGACTCTTTGGATGGTGGCTGGGCAGTGACAATTGGTGGTAGGCAAGTCCCTGTAGAGATGTGGACTAAGACATTCCCGAAGGATGGCCACCTAATCGAGGTTCGCAGCACGGTGGATAACAAGCAGGCATTCCAGCTGATCGCATTGCTTGTATTGACTTACTTTACCTTCGGGATTGGTTCGGCAGCTGCTGGAGCTTGGACAGTTGCAGGCGCATATGGTGCAGTGGCGGCAACTGCGGTCTATGTGGCTGGCTCAGTGATAATTAATAAGGTCCTTGGACCAAAGCCGCCTAAAACGCCCGCTGCTGAAGAGTCCGGAGGTGTTTACAGCCTTAATGGGGCAACAAATTCCAGCAGGCCATATCAGGCACTAGGCATCCCGTTTGGTGCTATCGACATCGCCCCAGATCTACTTTCAAAGCCTTACTCATACTTTGATGGTGATGACCAGTACTTGGCATTATTGCTCACTCCTGGTATTAATGTGGCAAGGGTTGACAATGTACGTAATGGGGACAACCCATTCTCGAATTATCCTGGCTCTCAGTTGTTTTCATCTGGGATGTCCGGTATGCCGCAACAGGCAATCCCGTTGTTCACGGACGTCGATAGTCAGGCTGGCGGCGCCTTACAGGACGAGGACAAGAATCCAGCAGTTGTCGTGAGAACAACACCTCCAGACACTGTTCGTATCCAGGTTGATATTGAATATACCTTGTTTGGTAAGGGAAAGAAGGGTAATGCACTTTACAATGAGGGCACAGTAACAGCAGAGTATCGTACAGCAGGTTCTGGGTCATGGTTAAATCTGGAGACGAGGTATGTAACAAATAAAGACATGCGCGTACATCGTATGTCCTTGAAGAAAGATGTTCCGCCGGGTCAGTACGATGTTAGGGTTACTCGCAGTGTTATGTCACTTACTGGCGACAATGATGTGGCTCAGTTTAACTTCACTAGCCTCACATCTGTGCAGAGGGATACTGCACAGTACCTTGGCATTTCGAGGGTAGGTATCATCTTTAAGGCTACCGGCCAGCTGTCTGGCACGCCAAATGAGATAAAGATGCGGGTAACTGCCAAGCCGGTACAGACCTGGACTGGCACTCAGTGGAGGATTGCAGATACTGTAGACAATGGACTGAGCAACCCAGGTGCACAGATGCTGGCCTATATCCGTGGTTACTATGATGAGGCTGGTAATCTAATTGGCGGTATGGGTCTGTCGGATATGTTCATCGACATCCCCGCATTTCAGGCGTTCATTCTTCATTGTGAGGCAAATGACTATAAGTACAACTACTACCTGCGTGATAGCAGGACACATAGTGAGGTACTTGAGTCAATTGCACTTGTTGGGTTTGGCCAGGTTACAAATGCCACAGGGAAAATATCTGTTGCATGGGCAGGTGCAAATCAGCCTGTTACTGCCGTTGTTGGTATGGGCACAATTCGCCAGGGGCAGTTTGGCGTTGACTACACATTGTCAAACACTGCGGACGGTGTCGAGCTCAGCTACTTTGATGCGGATATCGGAGACACATCCGTTGTACGTGTTGCATCACCTGGTGTTACTACCGCTCTGAACCCAGCACGTATACAAGCAGAGGGCATCACCACTGCCAAGCATGCAGCAGAGATGGCACGTTACCATCTCGGCCAGTCACTGTATCAGGCAAAGGACATAACGTTCGGCGCGGACATCGAGCACATCACCTACCGCAGGCTATCGGTGTTGTCCCTGTCACACGACCTAACACAGTGGGGGTACAGCGGTCGTTTGATGGCAGCTGCTAAGGTAAGTGGGGTTGTTACACTGTTTCTCGACACGGAAGTCCCTCCTCCTTCAGCTGGCAATGCCTATGTGGGTGTTCGGATACCTGGCGAGCTAAGCTACCGTGTAATGCAGGTAAGGCCATTCTCGTCTCCGTCTAAGTCAATCCAACTTGTTGGTGCTTGGCCTATTGATGCTGCCTTCCCAGGAGAGGCGAGTGACAACCCTGCTTGGGATACCACATACTGTTACGACTTTAAGGCAAGCCCGGGCTACACTGTGCGTGTTGTTGGAATTACGCCAGACGCAGACCTCAAAGGGGCGCAGGTGTCTGTTGTTCCCGAGTCCGCCGAGTTCTGGAATTATGTAAAGACAGGGACATACATACCAGCACCTAATGGCTCGGGCCTTAATACTCGACCTACAGTAAGCGGCCTGAAGATTGTTGAGGCGCAGGTTGTACAGGGTAACACTGTATTTACTGAGCTGAGTGCAACCTGGGAAGTGTCGGGCCCATATGCAAGGGCAGATGTGTTGATGGCCGAAGGGTCAGGCGATAGCTTGTTGCAAACGACCTCAACCACTCGCTCAGCAACCTGGAGGATTCCGGGTGCCGGTGTCTACACAGTCACTGTCAGGCCATTTAATCCAGATGGCCTAGCAGGGTATGCACAAAGCATTGTATTTGCCACTAAGGGTGCAGATGCCCCGCCAGTCAATCCCGACATATTTGATGTCCAGCAAGTGTCGGGCGGTCTGCGCAGGTATGTGTGGGGATTTGGGTCTGATACCATCCAAAGTGCTGATTATGCAGGTGTCGAGATCAGGTATACGTCAGGGTCTGTACAGTCTCCAGTATGGGAGACTATGCTGCCTGTGGCGGGTGATGATGGGAGTGGTTTCCACACTGCGCCCTTTGAGTCACCCACACCTGTATCTGGTACCTACACATTCTCGCTTAGGGCAGTAAATACATCTGGCCGTCTATCGGATCAAACTCTGACCATTGTGAGAGCACTTGGGAAAAACCTTGGTGAGCTGCTAGATCAGATCAATAATGATGTGTCTAAGGCAATCGTTGATGCTTTCCAGAGAGACGAGGCGGAGGCTCGGGCACGTGTGGATGCCATCAATGCTGTTATCACACAGGTGCAGGATGAGGCTACAGCACGTGCTACAGCAGTGCAGCAGGTAACTACTGCTCTCAATCAATCGATTGCAGATCAGACAGCAGCACTGCTCAATGAGCAGCTTGACAGACAGGCAGCAATACAGACTGCAAATCAGTTGAGGCAATCTGGTGATGAGTCTTTGGCTTACCAGATCTCACAGATAAGTGCCGGTACAGGCATGCAGTTTGATGGTATTAAAACTTGGTACTTCGACACGACTAGTGAAGGCTGGAATGGCACTGCTGCATCGGGGTATCTGAATCCTGGGGATGTCTACGCCACTTCGCCCACAGGCCTTGGTGTAAATGGTAGTGCCTATAGGTATGTCAGGATGCGGATCAAGAGGGTGGGAACACCTGTTTGGTCTGGGCAGCTTGGTTGGCGGAGTGCAGGCGGGACATGGTCCTCACTTGCACTGTCAGCTCCAACCTTTGATGCAAATGGGGTGGCAACAGTAGATGCTAATGATATCCCGTGGGCTGACACAACAGTTGACCAGATTAGGGTTAAGTTGTCAGACACCGTTACATCTAGCAACTACTACTTGTTTGACTGGGTAGCTATTGGTCGACCAACACCTGGTGCATCTGTGGCGTTGGTTGAGGATGTCCGTCAGGCTAATGCAACTGCCCTGGCAGCAGAGGCTCAGCAGCGCAACACTTTGGCTGTACAGCTGAGAGGCAACTACACTGGCAATGACCTTGATGGGTTGACTAGTGGCCTGGTCTACCAAGAGAGGACAGCCCGTGTTACAGAGACATCGGCAATTAGTACGCGTGTCGATGGTATGCAAGTATCTCTGGACGGCAAGGCATCTGCATCGGCCTTGCAGACACTGTCGACAAAGGTTGAGACAATTGATGACAGGGTTACAAGTGCATCCGAGTCTGTATTCGCGCTGGAGGCACAGCTGGATGGGCATACAGCCGGTGAAACAGGCTGGACAGCCGGTGATACCAGTGTGCATGTTGGTGCCAGGACTGTATACAGTGTGATTGCTGAGTCAGACCTTGCACTGGCACGGCGAGTTGATACAGTGTCTTCTGACCTTGGTCAGTTCAAGGGGTCTGCGACTCAGCAGCTCCAAACGCTGTCAACGGCCCAGGATGCACAGGCGCAGCTATACCAGCAGGTGTCTGCATCACTTGACACAAAGGCGAGCACATCCTCTGTTAATCTGCTTACAACAAGGGTTACAGAGGCTGAGGGTAACATAACTGCTAACTCTCAGAATATTGCACAGGCACAGGCAGCCATTGCAAATAAGGCAGACGCAAGTGCAGTAAGTGCCCTGCAAACAACTGTCAACACAATTGACGGGCGGACCACAGCCAATGCAAACTCAATCACGGCGGTACAGGCTGCCGTCGACGGTAAAGCGGCTGCAAGCACGGTGTTGGAGTTGACGGCCACTGTAAACTCACAGGGGTCAACACTGACGTCAATCAACTCCCAGGCATTCCTGGCACTCAATTCCAATAATTATATTGGTGGGTTTAAAATTGGGAATAATGGGCAGGTTGTGGATTTCACCGTTCTGGCGGATAACTTCCGGATTGTTGCTCCTGCTGGAGGCGCAAGGCTGGAATACAGTGCAGGCACACTGCGGGTCTATGACAACAACAATGTGCTGAGGGTTGAGCTAGGTAAACTTAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fffdb4cc7fec5f93c54c656f13a795bd031befc17f19f695f66ad8ff7c8da940
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome of Xanthomonas oryzae bacteriophage Xp10: an odd T-odd phage Yuzenkova,J., Nechaev,S., Berlin,J., Rogulja,D., Kuznedelov,K., Inman,R., Mushegian,A. and Severinov,K. 2003 12850143 GenBank