Protein

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UniProt accession
A0A0B5A7K5 [UniProt]
Protein name
Gene transfer agent-like protein
RBP type
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MATIAIAAAIGGAVAVGSYLLMSNRNTTVENEGSRLNSSRLTTSTEGASMSELYGRQRLNGQIIWATQFKETKNVETTKTKSGGKGGGGSSTTTKTTTYTYSISLAIAFCKGNSKASISRMWADGDEIDMSLLDFVFYPGDDTQDPDPTIEEVQGVGNVPAYRGTAYVVIKDLQLADYGNRVPQITAEIVVPLETDDPVDMQNSAEAYCLIPASGEHIYDPQQVNVFTGEKTTKPDNVHNAFREPDVVRGMKNLVRMQNDLKSVLLVVAWFGDDLRAGNCTIEPRHEGSTRYTSLTQSKDGREWSVMGQNRTYWSAVSTDGEGRPIYGGTPSDDGLKRLIAHLRDDLGLRVVFYPFVLMDVPTGNTLPNPYSDNAADVGQPAFPWRGRITCSPAPGYVGTADKTAAAKTQVDAWYDQYDVMVNHYAQLCDDAGGVAGFVIGSELVGLNRSRDALGSYPSVDRLVSLAASVKSTVGSGTDVTYAADWSEWYHSASDGHWFHLDPLWSSPNIDACGIDNYLPLSDWRDGTQHLDYDGVNGPVSPYEPDYLRSNIEGGEYFDWYYLNAADRAAQIRTPITDGAYGKPWVFRNKDFRSWWNNYHYNRPGYVEDASPTGWVPNSKPIWFTEFGFPAVDKGTNQPNVFYDPKSSESAYPYFSTGLRDDFIQRVATETVLDYWRNNTPESGGLKMIEPRNMFIWTWDARPFPDWPARGTVWSDGGLWFKGHWFTGRLESVPLARLVAALCEKAGLTPDQYDVTGLYGPGALVRGYEIDKVGKVRTQLETLMEAYLFDAFESEGKIKFLLRSGTRTSSVADDDLVVTDGDPVGVNLTRGQETELPSSVKVTFIDEFNDYNSGSVDGKTARGYSQNVQEIELPMLLTTDYCRSLADGLVQQRWVERQTGDLRLPPSLTKFDPGDAVTFPVGSHNITGRFTVMSFGEARDIEYSAFDPGIFSLPLSPDDERLPGLASIYGGVDVVFIDLPLFTGEEELPWAPRFVANANPWPGSVSLYKQLSDATYEFVNAQDVRNAVGELASPLQPGPVGRWDRGTVLHIAFDYGAISSVSEAIMLNSALAIGVYNAAVNEWEVIQFTTAAPQPDGTYYVTNLLRGQLGTEAAITGTDVPTGSTVVLLEPDTLATVVLTDEQSSNEIQFLYGPSRYPNTDDTYKTATHTGTRRGLQPYSPTDLQLEANAAGDLTLTWKRRTRFNGDNWGVSEPPLNEEFERYRVRIYNGPTVVREVETTSPTYTYSAADQTSDFGSGQSSLKVDAAQYGSAYGAYGAVTEATLTIGKVTP
Physico‐chemical
properties
protein length:1291 AA
molecular weight: 141917,68120 Da
isoelectric point:4,64797
aromaticity:0,10922
hydropathy:-0,38722

Domains

Domains [InterPro]
DC_1879
ATT
1–256
DC_1879 cd19607 IPR032876 IPR056490
G3DSA:3.20.20.80
STR
304–716
G3DSA:3.20.20.80 DC_1311
IPR025195
STR
417–708
IPR025195 DC_1657
A0A0B5A7K5
1 1291
Architecture
ATT
STR
ATT
STR
RBD
ATT 1-256 | STR 261-773 | ATT 774-929 | STR 930-954 | RBD 955-1287 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A0B5A7K5
1 1291
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,6042
Central domain 506 709 205 0,1091
C-terminal 710 1291 581 0,0846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-505
Central
506-709
C-terminal
710-1291

Taxonomy

  Name Taxonomy ID Lineage
Phage Paracoccus phage vB_PmaS-R3
[NCBI] 		2494563 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Paracoccus marcusii
[NCBI] 		59779 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
fd2f96cf3216531cd737ece0a0b05ecd503e363ba63d81715fcedc693e0d24ad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8739
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50