Protein

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Genbank accession
ADO99746.1 [GenBank]
Protein name
fiber
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MNGMHADGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDAAVAGDGAHLDGFAEYRKGWAHEHIKCSNDSFIQAVSVFAVGYGTHFTALSGADMSITNSNSNFGNTALRSAGFKAKAFSKDKAGAITHVIPPKALNVISTTATGTSGASTITLANDGSINGVIQGMTVNGSNIAPGATVISFNVNTRVITLSATNTGAVNNNIIFGEETSVNWVNVDIQRTKVVNAALAGSGGTPGSRLYLYGYTTEASPPTTKVQGYAVGARQDGTGVNAVPDKLNILLVANGANSATVQTAKISPYGPAVSSIAAGVAGSPIQYDSSTYTINGVAGSVGGWYLNVDATDNEIYTTLSTNTQYNNVNFTPSAFLKRIPDPRDLQDRTYRVRLVIDKDKTNPLPRDPLSGYVMQPLNSDTTNYNLQRAFYIYDIEIVQAFERGVSDGIFYLTLLCASISPSTSNFNDRKFSQNVNEVYPTFDRDNPLADPDAAISVADNETIGLVNSTDGASPTPNKDPKRSITKEGVEFLLTDTGWTQPGTTPNYDSVNKRLSNVELTARAGDEETRKINIRQNNDGTVAPIPVEFRRHSIMRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQIKFSQSIKEEAGVAFYSGLNSNGDLFIGNQIINPVTGQITNEDIAQLNVIGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGLTTFTNNIQAKKISYYNQDGTVIKQTLLAPEDANGQPSFANITGYTTPADGDLVYNINWSPGKSLGWIYYGGVWKEFGLTDTGDIDIATFNNEQHMGIGTAAVTGFRVGILGNAKVDGDLVVTGRGGVGADKYITKTYTGDGTTLTFAVTTYGGGIQHSDDSLLVSLNGVVQIAGTNYTVDANGANVVFSAGDAPLSTDTIHILELPI
Physico‐chemical
properties
protein length:921 AA
molecular weight: 97869,22770 Da
isoelectric point:4,90341
aromaticity:0,08686
hydropathy:-0,20999

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADO99746.1
1 921
Domain Start End Length (AA) Confidence
N-terminal 1 87 87 0,0212
Central domain 88 286 200 0,2777
C-terminal 287 921 634 0,2460
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-87
Central
88-286
C-terminal
287-921

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage Syn33
[NCBI] 		444878 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus syn33
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADO99746.1 [NCBI]
Genbank nucleotide accession
GU071108 [NCBI]
CDS location
range 23971 -> 26736
strand +
CDS
ATGAATGGTATGCACGCAGATGGCAGTAAGGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTTACAGGTCTATCTCTTCAGAAAGATGATAGAGCATTCGTAAGATATAATGCTTCTACTGGTAACTATGATGCAGCAGTTGCTGGTGATGGTGCTCACTTAGATGGTTTTGCTGAGTATCGTAAGGGTTGGGCACATGAGCACATTAAGTGTAGTAATGACTCATTCATCCAGGCAGTTTCGGTGTTTGCTGTTGGATATGGCACACACTTTACAGCACTTAGTGGTGCTGACATGTCGATTACTAACTCTAACAGTAACTTCGGAAACACTGCTCTAAGGTCTGCTGGATTCAAAGCAAAAGCATTCTCTAAAGATAAAGCAGGAGCAATTACGCATGTTATTCCTCCCAAGGCATTGAATGTTATTTCAACAACTGCTACGGGTACAAGTGGTGCTTCTACTATCACTCTTGCTAATGATGGTTCTATCAATGGTGTCATTCAAGGTATGACCGTAAACGGAAGTAATATTGCACCAGGTGCAACTGTTATTTCTTTCAATGTAAATACCAGAGTTATAACTCTATCTGCGACTAATACAGGTGCAGTTAATAACAATATTATCTTTGGTGAAGAAACTTCAGTTAACTGGGTAAACGTTGATATTCAACGCACAAAGGTTGTTAATGCTGCTCTCGCAGGTTCTGGTGGAACTCCTGGTAGTAGATTATATCTTTATGGTTACACGACTGAAGCATCACCGCCAACAACAAAGGTTCAGGGTTATGCTGTAGGTGCTCGCCAAGATGGTACGGGTGTTAATGCAGTTCCTGATAAGTTAAATATTCTTTTGGTTGCTAATGGAGCAAATAGTGCTACTGTTCAAACTGCAAAAATTTCACCATATGGTCCTGCAGTCTCTAGTATTGCTGCTGGTGTAGCAGGTTCGCCTATTCAATATGATAGTTCTACATATACAATTAATGGTGTTGCTGGATCAGTTGGTGGATGGTATTTGAATGTTGATGCAACTGATAATGAAATCTACACAACATTATCTACAAATACACAGTACAATAATGTTAACTTTACTCCTAGTGCATTCTTAAAGAGAATTCCTGACCCTCGTGATTTACAAGATAGAACCTATCGTGTTCGTCTTGTAATTGATAAGGATAAGACTAATCCTCTTCCTCGCGATCCCCTTAGCGGTTATGTTATGCAACCGTTGAACAGTGATACAACTAACTACAATCTCCAGAGAGCATTTTATATCTATGATATCGAGATTGTCCAAGCATTTGAACGAGGCGTTTCTGATGGAATCTTCTACCTTACCCTGCTTTGTGCATCTATTTCACCTTCAACTTCTAACTTTAACGACAGGAAGTTCTCTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTCTTGCTGACCCTGATGCTGCGATATCCGTCGCTGACAATGAAACTATCGGTCTAGTAAATTCAACCGATGGTGCATCACCTACACCTAACAAAGACCCTAAGCGTTCTATTACAAAAGAAGGGGTTGAATTCTTATTGACTGATACTGGTTGGACACAACCAGGAACAACACCTAACTATGATAGTGTTAATAAGCGCCTTAGCAATGTAGAACTTACTGCTCGTGCTGGCGATGAAGAAACCAGGAAGATTAATATCCGACAGAATAATGATGGCACTGTTGCTCCTATTCCTGTTGAGTTTAGACGCCACTCTATTATGAGATCTGGTAACCATACCTTTGAGTATCTTGGTTTCGGTCCTGGTAACTATTCAACTGCATTCCCTCAGACTCAAGTAGAGACGCTATCTGCTGACCAGATTAAGTTCTCTCAGTCTATTAAAGAGGAAGCAGGTGTTGCATTCTATTCAGGTCTAAACTCTAATGGTGACTTGTTCATTGGTAACCAGATTATTAACCCTGTTACTGGTCAGATTACGAACGAAGATATCGCACAGTTGAATGTTATCGGTGAAGAGAATACAACGATTGAAACATTCTCTGAGTTGGTTCTTACTGATAAACTCACCGTTATTGGTGGTGCATCTAACCAGTTAGAATCAATCTTTGCTGGTCCTGTTACATTCCAAGGACTTACAACATTCACAAATAATATTCAAGCGAAGAAGATTTCTTATTACAACCAAGATGGTACTGTAATTAAGCAGACTCTTCTCGCACCTGAGGATGCTAATGGTCAACCTAGTTTTGCTAATATCACGGGTTATACTACACCTGCCGATGGTGACCTTGTTTATAATATTAACTGGTCACCTGGTAAATCTTTAGGTTGGATCTACTATGGTGGTGTTTGGAAAGAGTTTGGTCTCACAGATACTGGAGATATCGATATTGCAACATTTAATAATGAGCAGCATATGGGTATTGGTACTGCTGCTGTTACTGGATTTAGAGTTGGTATCTTAGGTAATGCTAAAGTTGATGGAGACTTAGTTGTTACTGGTAGAGGTGGTGTTGGTGCTGATAAGTATATTACCAAAACATATACTGGAGACGGCACAACTCTTACATTTGCAGTTACTACCTATGGCGGTGGTATTCAGCACTCTGATGATTCCCTCTTAGTATCACTGAATGGTGTTGTGCAGATTGCAGGTACAAACTACACAGTTGACGCTAACGGTGCTAATGTTGTATTCAGTGCTGGTGATGCTCCATTATCTACTGATACTATTCACATTTTAGAACTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9e525f2ddd1aad8aea410de4d3c8cf87c65b630880fad7be4ceb6595cae34979
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn33 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank