Protein

View in Explore
Genbank accession
YP_009801007.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MASPDLIIRPFAESGEKQAPPQSDPNGFVNFSQGYTEDYEVDLNSGLTTAKAVERDIQNYLFHLLTGAVQAWQQMSISPWYAEMTGGYSAGAVVGRPNSSGAWQIWRSTADNNVSDPIASGQTSWEYVPFNSEIVKSVAMPAGGTALIVPGGTRTEVVTVAADFNSFINGTWEFQTDSVANSSANSPVQLGAASALAGMLESKSWVNGATSYTVQRYVDRSGNAFYRGATNTAWTKWTSVTQVNNFSIDTSGAANLIQGNALLSSLTLSNNQSFWVQIANSNTGATTFSPNPSIAAKQVVTLAGNPLAGLELFSGGRAFFTYNQPGDVWNLITCTLSPATAAPARRANQLPNVTQVIDFSSDTSDVVNVVRGAGQLYGNPGSPIDGQKWTIRVANSNNGSVTLSPNPSAPLQSLVGADNAALRGGELVAGNEIVVMYRAATTRYVLLKNQGGAQVGPNASQPNQLVNAAQLNTIRQARFTANGAFTVPAGVNRVSISGCGAGAGGGGGGTRNDRVNASSTATATGGGGGGAGQPINNVQYAVTPGSTLTITVGAGGAAGSGGASQNSPGSAGFNGGASIVSGLIAGTLTLSGGLGGNGGDVSLSPASGVPGGVGFPSGGDSLTITSAAPYGAAGAGASGPYGGGGSGGRCAGDTTTAGKPAFGFGAGGGGGGGLSNTSATTFGQPGGAGMPGIIIIEW
Physico‐chemical
properties
protein length:698 AA
molecular weight: 69832,97080 Da
isoelectric point:5,14077
aromaticity:0,07450
hydropathy:-0,08009

Domains

Domains [InterPro]
DC_0009
ATT
1–330
DC_0009 IPR049304
cd19958
STR
159–238
cd19958 DC_1053
YP_009801007.1
1 698
Architecture
ATT
STR
ATT 1-330 | STR 331-698
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Carpasina
[NCBI] 		2163636 Uroviricota > Caudoviricetes > Lindbergviridae > Carpasinavirus carpasina >
Host Xanthomonas campestris
[NCBI] 		339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009801007.1 [NCBI]
Genbank nucleotide accession
NC_047962 [NCBI]
CDS location
range 24961 -> 27057
strand +
CDS
ATGGCATCACCAGACCTTATTATCAGGCCTTTCGCTGAGAGTGGTGAGAAACAGGCGCCGCCGCAGAGCGATCCAAATGGGTTTGTAAACTTCAGCCAAGGTTACACTGAAGATTATGAAGTGGATTTGAACTCTGGATTGACGACTGCCAAGGCCGTTGAGCGTGATATTCAGAACTATCTGTTTCACCTTCTGACTGGGGCTGTGCAGGCGTGGCAGCAGATGTCGATATCCCCTTGGTATGCAGAAATGACAGGCGGGTATAGTGCCGGTGCCGTCGTTGGGCGCCCTAACTCTTCGGGGGCCTGGCAGATTTGGCGCTCTACGGCAGACAATAACGTTTCAGACCCAATCGCAAGCGGCCAGACTTCATGGGAATACGTACCATTCAACTCTGAGATTGTTAAGTCCGTTGCGATGCCTGCTGGTGGTACTGCCCTTATCGTTCCAGGCGGCACCAGAACTGAGGTTGTAACTGTTGCCGCAGATTTTAATTCATTTATTAATGGAACTTGGGAGTTTCAAACTGACTCTGTCGCAAATTCAAGCGCCAACTCTCCTGTTCAACTTGGCGCAGCCAGTGCGCTTGCCGGAATGCTTGAGTCGAAAAGCTGGGTTAACGGGGCGACTTCCTACACCGTTCAACGCTATGTTGATCGAAGTGGTAATGCGTTCTATCGCGGCGCGACGAACACGGCTTGGACTAAGTGGACAAGCGTCACGCAGGTAAACAACTTCAGCATTGACACATCTGGCGCCGCAAATTTGATCCAAGGCAATGCCTTGTTGTCATCTCTCACACTCTCAAACAACCAATCATTTTGGGTCCAGATAGCTAACTCAAATACTGGAGCAACAACATTTTCGCCAAATCCATCTATCGCAGCTAAACAAGTTGTTACGCTTGCCGGCAATCCATTGGCTGGGCTTGAGTTGTTTTCTGGTGGACGGGCATTTTTCACTTATAACCAACCTGGTGATGTTTGGAATTTGATAACCTGCACTCTATCACCAGCAACTGCCGCGCCAGCTCGCAGAGCTAACCAGCTTCCAAACGTGACACAGGTAATTGATTTTTCTTCTGATACATCGGATGTGGTGAATGTTGTTCGCGGTGCAGGGCAATTGTATGGTAATCCTGGATCACCAATAGATGGACAAAAATGGACTATCCGCGTAGCTAATTCAAACAACGGCTCTGTTACTTTGTCGCCAAATCCTTCAGCGCCGTTGCAGTCGCTTGTTGGGGCTGATAATGCCGCGCTTCGGGGTGGTGAATTAGTCGCAGGAAATGAAATTGTTGTCATGTATCGCGCGGCGACAACGCGATACGTTTTGCTCAAAAACCAGGGAGGGGCGCAAGTTGGCCCAAACGCATCGCAACCTAATCAATTGGTAAATGCGGCTCAGCTGAATACGATTCGCCAGGCGCGTTTTACGGCAAACGGAGCCTTCACAGTGCCAGCTGGAGTAAACAGAGTTTCAATAAGCGGTTGCGGAGCTGGCGCTGGCGGCGGCGGCGGCGGCACTCGAAACGACAGGGTGAACGCGTCTAGTACTGCGACCGCAACTGGCGGCGGCGGCGGCGGAGCGGGCCAGCCGATCAATAATGTTCAATACGCAGTAACGCCGGGTTCAACTCTGACGATTACTGTTGGTGCAGGTGGAGCTGCCGGATCAGGAGGGGCGAGTCAAAACTCACCAGGCTCCGCAGGATTTAACGGCGGCGCTTCAATTGTGTCAGGACTTATAGCTGGAACGCTTACTCTTTCAGGAGGTCTTGGTGGTAATGGCGGCGATGTCTCGTTGAGTCCAGCGAGCGGGGTTCCTGGTGGCGTCGGGTTCCCTTCTGGGGGCGACTCCCTCACGATCACGTCAGCCGCGCCATACGGAGCCGCTGGCGCTGGCGCATCAGGTCCGTATGGCGGCGGCGGCAGCGGCGGTCGATGCGCAGGCGATACGACGACTGCTGGAAAGCCTGCGTTCGGGTTTGGCGCAGGCGGCGGCGGCGGCGGCGGCTTATCAAACACAAGTGCCACCACATTTGGACAACCAGGCGGCGCGGGCATGCCCGGAATTATTATCATTGAATGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ec497475715d85d7c7f5bc6d46a2b98d3cb3f970a454a62a803594cafc192efb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7749
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy in agriculture - a green tech approach to combat plant pathogenic bacteria Carstens,A.B., Djurhuus,A.M. and Hansen,L.H. 2021 — GenBank