Protein

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Genbank accession
AGN12091.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,87
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSLQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGDVLYTNVAPIDANSNLDLTSPNNVLYKYNSVEGGIIVPRGCSVVGTDLRRTKIIPKYVPYPTTYPAQGINTEAQVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSVTTLAPKFSHHRLTCFEFADGLNPLSTLIANGTVPNADYSAVSNILARTDLEIYYQKVSKAFATIPDTSGDPSTDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDDPRDHGFSVGVNINVSGVTGSTGSQSEPDAALYNGSFTVTSASGNVFTYQMQGEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHANGAKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDVATAGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYFGHFIAESGGDMSITNSNSNFGNTALRSAGFKAKAFSKDKAGALTHIIPPKALNVISTTATGASGSNTITLANDGSVNGVIQGMTITGTNIGVGATVGNINVSTRVLTLTATNTGAINGNVIFGEETSINWVNIDIQRTKTINASLAGQGGTPGTRLYLYGYTVEASPPTTRVQGFAVGARQDGTGASAIADKINCLLVAQGATEASVQSASISPYGPSVSGLAAGVVGSPLQYDANTYTINGVAGSVGGWYLSVSSVNNAIYTTLSTNTTYNTVNFTPTTFLKRIPDPRDLQDRTYRVRYVIDKDKTNPLPRDPLSGYVMQPLNSDTTSFNLNRCFYIYDIEVVQPFVRGTDDGIYYLTLLCASIAPSTSNFNDRKFSQNVNEVYPTFDRDNPIADPDAAVSIADNETIGLVNSTDGASPPVKDPKLSITKEATVFLLTDTGWTQPGTTPNYDSVNKRLSNVELTARAGDEEVRKINIRENNDGTVAPINVEFRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSQDQIRFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDVAQLNVVGEENTTIETFSELVLTDKITVIGGASNQLESIFAGPVTFQGQTTFTNNISAKKLTYFNQDGTVIKQTLLAPENASGLPDFSNITGYDTPADGDIVYNINWTPGKSLGWIYYGAVWKEFGLTDTGDINISTTGNGHIGLGESPDATYRVRINGSVRIDGDVVGTGRGVVGSDKYITKFYTGDGTTLTFAVTTYGGGIKHSDDSLLVFLNGVAQIAGQNYTVDANGANVVFSSGDAPLSTDTIHILELPI
Physico‐chemical
properties
protein length:1318 AA
molecular weight: 141306,99050 Da
isoelectric point:4,88647
aromaticity:0,09408
hydropathy:-0,20599

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGN12091.1
1 1318
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,9539
Central domain 83 311 230 0,9726
C-terminal 312 1318 1006 0,0960
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-311
C-terminal
312-1318

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM3
[NCBI] 		536453 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus pssm3
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
78467226326614b537a5e24c414367942a529352f16720a241bfae676914d589
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3706
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50