Protein

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Genbank accession
YP_002128490.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSIVNIFTKSAPTLAGMEFDAVLEDTLDVTATITDYTIEIGARVGDHRIINPIKWTLTGAVSNTPIGPTATDFIGGVISELGGGGVLSTLAGLSSGYLAGSDQTRASSTIDILMQIMSQGEPFDIDAGDVQLTNMVITRMTRTKDASNEGGLIFTCELQELPTLSTVLSKQQPKQDQLRDGDPAKTGVAALINKGEVAVKEAGQKVNAAVSEVLGGLF
Physico‐chemical
properties
protein length:218 AA
molecular weight: 22772,57960 Da
isoelectric point:4,43915
aromaticity:0,04128
hydropathy:0,08853

Domains

Domains [InterPro]
DC_0601
STR
1–217
DC_0601
IPR048494
ATT
19–165
IPR048494
YP_002128490.1
1 218
Architecture
STR
ATT
STR
STR 1-18 | ATT 19-165 | STR 166-217 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Iodobacter phage PhiPLPE
[NCBI] 		551895 Uroviricota > Caudoviricetes > Iodovirus >
Host Iodobacter sp. CdM7
[NCBI] 		641420 Bacteria > Proteobacteria > Betaproteobacteria > Neisseriales > Chromobacteriaceae > Iodobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002128490.1 [NCBI]
Genbank nucleotide accession
NC_011142.1 [NCBI]
CDS location
range 31005 -> 31661
strand +
CDS
ATGAGCATAGTAAATATTTTCACTAAAAGCGCGCCTACGCTGGCCGGTATGGAATTTGACGCTGTGCTAGAGGATACGCTTGATGTCACTGCCACGATCACTGATTACACGATTGAGATCGGTGCGCGTGTCGGCGACCACCGAATCATTAATCCAATCAAATGGACGCTAACCGGTGCAGTGAGTAATACGCCAATTGGGCCAACTGCCACCGATTTTATCGGAGGAGTGATATCAGAGCTTGGAGGCGGCGGTGTACTGTCAACGCTTGCCGGTCTATCTTCTGGATACCTTGCTGGATCTGATCAGACACGGGCCAGCTCAACAATCGATATTCTCATGCAAATCATGTCACAGGGCGAGCCATTTGATATTGATGCGGGCGATGTTCAGCTAACCAATATGGTTATTACGCGCATGACGCGCACAAAAGACGCCAGCAATGAGGGCGGCCTAATCTTTACCTGCGAATTGCAGGAGCTGCCGACACTCTCCACCGTTCTTTCTAAGCAGCAGCCAAAGCAGGATCAGCTACGCGATGGCGACCCGGCAAAAACTGGCGTTGCTGCGCTGATTAATAAGGGCGAGGTTGCAGTAAAAGAGGCTGGACAGAAAGTAAACGCTGCAGTTAGTGAAGTCTTGGGAGGGCTATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d0f8873f5377e46eff4cf55b3c57bf327c5cd403bc2a381a5cc9c6eb3e7c573
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7568
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50