Protein

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Genbank accession
AFN37357.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIEVNIDDLLKNGKVTFEFEKADGTIKTVTGTRNLDFIPAEFHPKEKPLAEGETKPEKTEKQKATCGYFDLEANGWRSFKRANLREVKSFV
Physico‐chemical
properties
protein length:91 AA
molecular weight: 10393,68960 Da
isoelectric point:6,59232
aromaticity:0,09890
hydropathy:-0,73187

Domains

Domains [InterPro]
IPR024401
STR
6–84
IPR024401
AFN37357.1
1 91
Architecture
STR
STR 6-84 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi-pp2
[NCBI] 		1204514 Uroviricota > Caudoviricetes > Pantevenvirales > Schizotequatrovirus > Schizotequatrovirus KVP40
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFN37357.1 [NCBI]
Genbank nucleotide accession
JN849462.1 [NCBI]
CDS location
range 76380 -> 76655
strand +
CDS
ATGATTGAAGTGAATATCGACGACTTGCTTAAAAACGGCAAAGTCACATTTGAATTTGAGAAAGCAGACGGTACTATCAAGACAGTGACTGGTACGCGCAATCTCGATTTCATCCCTGCTGAGTTTCACCCGAAAGAAAAGCCTTTAGCTGAAGGCGAGACGAAGCCAGAGAAAACAGAAAAGCAAAAAGCAACATGCGGTTATTTCGATCTTGAAGCTAACGGCTGGCGCTCATTCAAACGTGCAAATCTTCGCGAAGTAAAATCGTTTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3f78278146c82db53fb5d6a78641f7343bf79dfc793d67c37c2b16b6e711ed28
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome-wide characterization of vibrio phage phipp2 with unique arrangements of the mob-like genes Lin,Y.R. and Lin,C.S. 2012 22676552 GenBank