Protein

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Genbank accession
XAO35929.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MTLSIGTMMTSCRERAIAEIDPILPEDFVGFWWRDIRPSGKNVNSWPPHAGYSNPDRTLVAAKAEGSSVPTYSADGWVICQDVVNNAKSGFILSNRVGEPIRSPALTMSRAGQTKLYLRFNVWLHTLLTKRTIYTTQWGENGATRGLTVTLDAGAIYVSWLSSDGDESQTAKVISIPASAINNWIWLRVFIEKGNKIIVEVWNNTMTTILNTAESPFVGLLPAPATAQHYVFWGSEHETSPGNGFFKDFGYGTDFDMPPEPRVVGGTR
Physico‐chemical
properties
protein length:268 AA
molecular weight: 29605,15190 Da
isoelectric point:6,10078
aromaticity:0,10821
hydropathy:-0,18209

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO35929.1
1 268
Domain Start End Length (AA) Confidence
N-terminal 1 18 18 0,5298
Central domain 19 217 200 0,1073
C-terminal 218 268 50 0,7163
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-18
Central
19-217
C-terminal
218-268

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage IQPL
[NCBI] 		3138288 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO35929.1 [NCBI]
Genbank nucleotide accession
PP541513 [NCBI]
CDS location
range 77557 -> 78363
strand +
CDS
ATGACACTTAGTATTGGGACCATGATGACTTCATGCAGGGAGCGGGCTATCGCTGAGATCGACCCTATTCTCCCGGAAGACTTCGTTGGTTTCTGGTGGAGGGATATCAGACCATCCGGCAAGAATGTCAACTCTTGGCCACCTCACGCAGGGTATTCGAACCCTGACCGAACGCTAGTAGCTGCTAAAGCGGAGGGTAGTTCTGTACCTACCTACTCCGCAGATGGGTGGGTTATCTGTCAGGATGTTGTGAATAACGCTAAAAGCGGATTCATTCTATCCAACAGAGTAGGTGAGCCAATTCGAAGTCCGGCACTCACTATGAGTAGGGCGGGACAGACTAAACTCTACCTGCGGTTCAACGTCTGGCTACATACCCTACTTACAAAGCGTACAATCTATACGACTCAGTGGGGAGAGAATGGTGCTACACGCGGGCTGACTGTAACCCTCGACGCAGGAGCCATTTACGTTTCTTGGCTATCTTCGGATGGAGATGAATCCCAAACGGCAAAAGTTATCAGTATCCCAGCTAGTGCCATTAACAACTGGATTTGGTTACGGGTGTTTATTGAGAAGGGTAACAAGATCATCGTAGAAGTCTGGAACAACACGATGACCACTATTCTTAATACCGCAGAGAGTCCTTTTGTAGGTCTTCTTCCAGCCCCTGCTACAGCCCAACACTATGTGTTTTGGGGTAGTGAGCATGAAACATCTCCGGGCAATGGCTTCTTCAAAGACTTCGGTTACGGCACAGACTTCGATATGCCACCGGAACCTAGAGTAGTTGGCGGAACTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8426db5fa94a8a5152dc5733d8bb12d706208735d3f223e79bacf3e0f07d79c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
characterization of IQPL bacteriophage Alvi,I.A., Idrees,A., Asif,M. and Rehman,S.U. 2021-06 — GenBank