Protein
View in Explore- Genbank accession
- WMC01448.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TF
- Protein sequence
-
MADLPALRIPDLRFEKIFDSGLYVIGYIFVEGIYICDFLVPSQLQIPCAKYEYKLYNSPTHGIVPLILNVPNRSMIEVHKGNTIKDSRGCFLVGYNLSKGSVSNSALAMQVLRRNIIPADYPLLTNRTFKGEFNYVPIARS
- Physico‐chemical
properties -
protein length: 141 AA molecular weight: 15918,41110 Da isoelectric point: 9,01018 aromaticity: 0,11348 hydropathy: 0,10709
Domains
Domains [InterPro]
IPR043732
STR
23–115
STR
23–115
IPR043732
STR
25–105
STR
25–105
1
141
Architecture
STR 23-115 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Microvirus D_HF4_144 [NCBI] |
3071173 | Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WMC01448.1
[NCBI]
Genbank nucleotide accession
OR148993.1
[NCBI]
CDS location
range 4091 -> 4516
strand +
strand +
CDS
ATGGCTGATTTACCCGCACTTCGAATTCCCGATTTAAGGTTTGAAAAAATCTTTGATTCTGGCCTATATGTTATAGGTTACATCTTTGTTGAAGGAATTTATATTTGTGATTTCCTTGTTCCTTCACAGTTGCAAATACCCTGCGCTAAATATGAATATAAACTTTACAACTCACCAACTCATGGAATAGTACCTTTAATTCTAAATGTACCTAATCGCTCCATGATTGAAGTACATAAAGGTAATACTATTAAGGATTCAAGAGGCTGTTTCCTTGTAGGTTATAATTTAAGTAAAGGTTCAGTTTCTAACTCTGCTCTCGCTATGCAAGTTCTTAGGCGTAATATTATTCCTGCCGATTATCCACTATTAACAAACCGTACTTTTAAAGGAGAGTTTAATTATGTCCCTATTGCTCGGTCTTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
0fc3bc4e45b384faf370bfe6dd23c0ef4ed74df85d5fa0b193851517f1d9d9ad
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Characterization of diverse anelloviruses, cressdnaviruses, and phages in the human oral virome in North Carolina | Paietta,E.N., Kraberger,S., Custer,J.M., Vargas,K.L., Epsy,C., Ehmke,E., Yoder,A.D. and Varsani,A. | 2023-08-26 | — | GenBank |