Protein

View in Explore
Genbank accession
YP_010668113.1 [GenBank]
Protein name
tail length tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MADSVVIREFLVALGFKVDEKGLKNFKEGVEGTTKGVKQLIATVSGAALTVSAGVAAFASKLERLYFVSQRTGASATNLRGFEFAARNMGVSAEAATGTIENLARFLRNNPAGEGYLATLGVQTRNANGELRDTVDIMSDLGKSLANKPTWLASQYGNILGIDENLMLAMRNGDFEKLLAQYREMSKSTGLDKAADDSHRFMTQLRGLGTSFENLGIRVEGAMLQKIGPQLERFQRWMDEHGDEIANRITDIANAVVKAAAAMGPPLAWLADKFVELDRGTDGWSTKILLLGVALKALGVFKIAGGIWKIVGALRAGGAAASGATGLLSAMGVELAALASSAAAVGAAFLGWKIGDGVRDQIDGLITKLSGGRFRSLWDILTLKDRRGLDSTGGYTQAEIDSVKDGGGAKLTPPRGEQSRIPASLVTPEPAPREPAERPQEPPARISDSQGATPQPQPRPLPQAQPPMWPQPVQQPAAAPSLAPRIERVAVHDDGGLAGRLGQLADTAFGKLIARGEGDYNSVNRGARGGYRAGTENLEGMTLAQVMAAQRAGQFNAAGRYQIIGSTLAEAARGLKLNGSEMFDRKLQDRIFEQYLVRNKRRAIADYVEGRSDDLRGALRAASREWASVADPDTGRSYYAGKGNNRASITAAEMAAALRNTRATYQPPAALVAQPAARGGAAKVELHQSTQIHVTGASDPSAAGRAVEREQRAVNADMVRNLQGVIA
Physico‐chemical
properties
protein length:727 AA
molecular weight: 77132,51380 Da
isoelectric point:9,47203
aromaticity:0,05777
hydropathy:-0,25378

Domains

Domains [InterPro]
DC_0145
STR
1–725
DC_0145
G3DSA:1.10.530.10
RBD
505–651
G3DSA:1.10.530.10
IPR023346
STR
508–635
IPR023346
YP_010668113.1
1 727
Architecture
STR
STR 1-725 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Magia
[NCBI] 		2767577 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010668113.1 [NCBI]
Genbank nucleotide accession
NC_070954 [NCBI]
CDS location
range 11934 -> 14117
strand +
CDS
ATGGCTGATTCGGTCGTCATCCGCGAGTTCCTGGTCGCGCTCGGCTTCAAGGTCGACGAGAAGGGCCTGAAGAACTTCAAGGAAGGCGTCGAAGGCACGACCAAGGGCGTTAAGCAGCTGATCGCGACGGTGTCTGGCGCCGCGCTCACGGTGAGCGCGGGCGTCGCGGCATTCGCGTCGAAGCTCGAGCGCCTGTACTTCGTGTCGCAGCGGACCGGCGCGTCGGCGACCAATCTGCGCGGCTTCGAGTTCGCCGCGCGCAACATGGGCGTCTCGGCCGAAGCGGCCACGGGCACGATTGAGAACCTTGCGCGCTTCCTGCGCAACAACCCGGCGGGCGAGGGCTACCTCGCGACGCTCGGCGTGCAGACGCGCAACGCAAACGGCGAGCTGCGCGACACGGTCGACATCATGTCCGACCTCGGGAAGTCGCTGGCGAACAAGCCGACGTGGCTTGCCAGTCAGTACGGCAACATTCTCGGCATCGACGAGAACCTGATGCTCGCGATGCGCAACGGGGACTTCGAGAAGCTCCTCGCGCAGTACCGCGAGATGTCGAAGTCGACCGGTCTGGACAAGGCGGCCGACGACTCGCACCGCTTCATGACGCAGCTGCGCGGACTCGGCACATCGTTCGAGAACCTCGGCATTCGCGTCGAGGGTGCGATGCTGCAGAAGATCGGGCCGCAGCTCGAACGGTTCCAGCGTTGGATGGATGAGCACGGCGACGAGATCGCGAACCGGATCACGGACATCGCCAACGCGGTCGTGAAGGCGGCCGCAGCGATGGGGCCGCCGCTGGCGTGGCTTGCGGACAAGTTCGTTGAGCTCGATCGTGGCACCGACGGCTGGTCGACGAAGATTCTGCTGCTCGGCGTAGCGCTGAAGGCTCTGGGCGTATTCAAGATCGCAGGCGGAATCTGGAAGATCGTGGGAGCACTGCGCGCCGGCGGTGCGGCGGCCAGCGGGGCAACCGGTCTGCTTTCTGCGATGGGCGTCGAGCTGGCTGCCCTGGCATCGAGTGCGGCGGCGGTCGGCGCCGCATTCCTCGGTTGGAAAATCGGCGACGGTGTGCGCGATCAGATCGACGGTTTGATCACGAAGCTGTCGGGCGGCCGCTTCCGTTCGCTGTGGGACATTCTGACGTTGAAGGATCGCCGCGGCCTCGATTCGACCGGTGGATACACACAGGCCGAAATCGACAGCGTGAAGGACGGCGGCGGCGCGAAATTGACGCCACCGCGCGGCGAGCAGTCCCGGATACCGGCGTCCTTGGTCACACCGGAGCCGGCTCCAAGGGAGCCGGCCGAACGTCCGCAGGAGCCTCCCGCGCGAATCTCAGATTCGCAAGGTGCGACACCGCAACCGCAGCCTCGACCGCTCCCGCAGGCTCAACCGCCGATGTGGCCGCAGCCGGTACAGCAGCCAGCGGCAGCTCCGTCGCTGGCACCGCGGATCGAGAGGGTTGCGGTTCACGACGACGGCGGTCTGGCTGGCCGGCTCGGCCAGTTGGCGGACACCGCGTTCGGCAAGTTGATCGCGCGCGGCGAAGGCGATTACAACAGCGTGAACCGCGGCGCGCGCGGCGGTTACCGCGCCGGCACCGAGAACCTCGAGGGCATGACGCTGGCGCAGGTGATGGCGGCGCAGCGCGCGGGGCAGTTCAACGCGGCGGGCCGATACCAGATCATCGGCAGCACACTGGCCGAGGCCGCACGCGGGTTGAAGCTGAACGGGTCCGAGATGTTCGACCGGAAGCTGCAGGACCGGATCTTCGAGCAGTACCTCGTGCGCAACAAGCGTCGTGCGATCGCCGATTACGTCGAAGGGCGTAGCGACGACCTGCGCGGCGCTCTGCGCGCGGCGTCGCGCGAGTGGGCGAGCGTCGCAGACCCGGATACTGGTCGCAGCTACTACGCTGGCAAGGGCAACAACCGTGCGAGCATCACGGCCGCTGAAATGGCGGCCGCGCTGCGGAACACTCGCGCGACTTACCAGCCGCCGGCCGCGCTGGTCGCGCAACCGGCAGCGCGCGGCGGCGCGGCGAAGGTCGAGCTGCACCAGTCCACGCAGATCCATGTGACCGGCGCTAGCGATCCTTCGGCGGCCGGCCGTGCGGTCGAGCGCGAGCAGCGCGCGGTGAATGCAGACATGGTGCGCAATCTGCAGGGGGTGATCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
88fd8bc79c8e566af915cafcfa28c7bf7690e12a443e85d9f057231334837e58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Burkholderia cenocepacia myophage Magia Gafford-Gaby,D., Yao,G.W., Hernandez,I., Clark,J., Gonzalez,C., Gill,J. and Liu,M. 2021-02-11 — GenBank