Protein

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Genbank accession
QPI18060.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MRSEKLIPFDQIGEGGSSVPGPQGPQGERGEPGPQGPEGSTGPQGEQGPAGATGPVGPSGATGLVWRGNYDDSVSYDINDAVGYQGATYFSTQPSTGIPPEPTGTRVNDHWALMASEGAPGPVGPAGPTGPQGLQGPVGPAGPSGETGPAGPAGPQGGQGPQGLQGPQGQRGIQGPQGEKGEKGDQGQMGPAGPAGPQGEQGPPGETGPKGDKGDNALPTISGIYSSPINKTNSWIQLPGNNLGNVRLILSANNNVSQTRVGFSAGTSSVAKRIGFSYALTTTYTDVNRIKTGRTGPTSISNTVVYPSDSTINVGFGDKVVLVVFCHDTLEAWEVTVAGVAQKTAVGDTNGRLAVHAVQISGDSTLLTGNVYNP
Physico‐chemical
properties
protein length:374 AA
molecular weight: 37505,58900 Da
isoelectric point:4,86351
aromaticity:0,05080
hydropathy:-0,52861

Domains

Domains [InterPro]
IPR008160
STR
18–63
IPR008160 IPR008160 DC_1012
IPR050149
Unmapped
20–216
IPR050149
DC_0876
STR
20–151
DC_0876 DC_2298
G3DSA:1.20.5.320
STR
187–239
G3DSA:1.20.5.320
QPI18060.1
1 374
Architecture
STR
STR
RBD
STR 18-151 | STR 157-250 | RBD 251-372 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage POP15
[NCBI] 		2759209 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI18060.1 [NCBI]
Genbank nucleotide accession
MT560059.1 [NCBI]
CDS location
range 11373 -> 12497
strand +
CDS
ATGCGTAGTGAGAAGCTGATCCCCTTCGACCAAATTGGCGAGGGAGGGTCTTCTGTGCCCGGCCCACAGGGTCCGCAAGGGGAGAGGGGTGAACCCGGCCCTCAAGGCCCTGAAGGCTCTACAGGCCCGCAAGGGGAACAGGGACCCGCCGGGGCAACAGGCCCTGTTGGGCCTTCCGGGGCAACAGGTCTCGTATGGAGAGGGAACTATGATGATTCAGTCTCCTACGACATTAACGATGCAGTTGGGTATCAGGGGGCCACATATTTCTCTACCCAGCCATCCACAGGTATCCCACCAGAACCTACTGGTACAAGGGTTAACGACCACTGGGCATTAATGGCCTCAGAGGGTGCGCCGGGACCAGTGGGTCCAGCCGGACCAACAGGTCCTCAGGGTTTGCAAGGACCAGTAGGACCAGCCGGGCCTTCTGGTGAGACAGGACCAGCCGGACCCGCCGGGCCACAAGGAGGGCAAGGCCCTCAAGGGCTACAAGGACCACAAGGTCAGCGAGGTATTCAAGGCCCCCAGGGTGAAAAAGGGGAAAAGGGAGATCAAGGACAAATGGGTCCGGCAGGCCCTGCTGGCCCGCAAGGGGAACAGGGTCCTCCGGGGGAGACTGGCCCTAAGGGGGATAAAGGTGACAATGCCCTCCCGACCATTTCTGGGATTTATTCCTCCCCGATCAACAAAACGAACTCTTGGATTCAACTCCCCGGTAACAACTTGGGGAATGTTCGTCTTATTCTCTCTGCAAACAACAATGTCTCTCAGACCCGAGTTGGTTTCTCCGCAGGAACTTCGTCAGTGGCGAAGAGGATCGGATTCTCTTATGCACTAACAACAACTTACACGGACGTAAATCGTATTAAGACCGGGAGAACCGGCCCCACCTCGATCTCAAATACAGTAGTTTATCCGTCGGACTCTACTATCAACGTGGGGTTCGGCGACAAGGTAGTCCTTGTTGTTTTTTGCCACGACACCCTTGAAGCATGGGAAGTGACAGTGGCAGGGGTTGCCCAAAAAACTGCTGTAGGTGATACAAACGGGCGTTTGGCTGTACATGCAGTACAGATCTCCGGGGACAGTACGTTACTCACAGGTAATGTCTACAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cc168cc891f19de5161c15b400545b8d8fa10c8c13ae26636e0a688def6dbf7b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50