Protein

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Genbank accession
YP_009855351.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MLKLTKKGDKYWLFEDSEIGLFSPSKFTINLLNNVITIVYENGLKSKTYNVIDCEIYDLGSLVPFTTSSGDDFMAKLEELNCPCFQKNENIYIGSGGTWSDLTDFNSLTDATTPLSGTEEIPIVQSGVTKKVAVSEIAGGATPSLQDVTDVGNTTTNDITIGEKLIFTAGAEISDDGGEMILQHDLGISLRSTKDGFQVNFISAPIDTITDNVNVSMPNESGIIATREWVNAKNNLQWLVKDTTPTTAVTGTTSRTQIGSSILIPDNTFSTEDVMILDGYAVEKGAGIGTCQIQIWHNTSDTLTGATAIAVFSMANANVSAKMVRTFEISEGLLKCRINGTTNAISDIGALSFTPLSISFDPTIDNYFFTTVNLGNASDSVTRTQLLISK
Physico‐chemical
properties
protein length:390 AA
molecular weight: 41969,68180 Da
isoelectric point:4,37782
aromaticity:0,07436
hydropathy:-0,02795

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage vB_FspS_snusmum6-1
[NCBI] 		2686273 Uroviricota > Caudoviricetes > Muminvirus >
Host Flavobacterium sp. LMO6
[NCBI] 		2654243 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Flavobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009855351.1 [NCBI]
Genbank nucleotide accession
NC_048841.1 [NCBI]
CDS location
range 36585 -> 37757
strand +
CDS
ATGCTAAAACTAACTAAAAAAGGAGATAAATACTGGTTGTTTGAAGATAGCGAAATTGGACTTTTTTCGCCATCTAAATTTACTATAAATTTATTAAACAACGTAATTACAATAGTTTACGAAAATGGTCTTAAATCTAAAACATATAATGTTATAGATTGCGAGATTTACGATTTGGGTTCTTTAGTTCCGTTTACTACTTCAAGCGGTGATGATTTTATGGCTAAATTAGAGGAGTTAAATTGTCCTTGTTTTCAAAAGAATGAAAATATTTATATTGGTAGCGGTGGAACTTGGTCTGATTTAACCGACTTTAATTCATTAACAGACGCTACAACACCCTTATCAGGCACAGAAGAAATACCAATTGTTCAAAGTGGCGTTACTAAAAAGGTTGCGGTTAGTGAAATTGCCGGAGGTGCAACACCATCTTTACAAGATGTTACTGATGTTGGCAACACAACTACTAATGATATAACTATTGGGGAAAAATTAATTTTTACAGCTGGTGCTGAAATTTCAGACGATGGTGGCGAAATGATATTGCAACACGATTTAGGTATATCATTAAGAAGTACAAAAGATGGATTTCAAGTAAATTTTATTTCTGCTCCAATTGATACAATTACAGATAATGTTAATGTTAGCATGCCAAATGAAAGCGGAATAATCGCTACTCGTGAATGGGTAAATGCTAAAAATAATTTACAATGGCTTGTTAAAGATACAACTCCAACAACAGCGGTTACAGGTACAACTTCAAGAACGCAAATTGGTAGCAGCATATTGATTCCAGATAATACTTTTAGTACTGAGGATGTAATGATTTTAGATGGTTATGCGGTTGAAAAAGGTGCAGGAATAGGAACTTGCCAGATTCAAATTTGGCACAATACAAGTGACACACTTACAGGCGCTACTGCAATTGCAGTTTTTTCAATGGCTAACGCTAACGTTTCAGCTAAAATGGTACGAACTTTTGAAATATCAGAAGGTTTATTGAAATGTAGAATTAATGGAACAACTAATGCAATTTCAGATATTGGAGCTTTATCGTTTACGCCTTTATCAATTTCTTTCGACCCGACTATTGATAACTATTTTTTTACAACCGTTAATTTAGGTAATGCATCAGATTCAGTAACAAGAACTCAACTTTTAATATCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4365e9f77ca72b1977026fbaa068eddfeaa3565b8a9010595f5473a838c51d79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6583
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity and Host Interactions Among Virulent and Temperate Baltic Sea Flavobacterium Phages Nilsson,E., Bayfield,O.W., Lundin,D., Antson,A.A. and Holmfeldt,K. 2020 — GenBank