Protein

View in Explore
Genbank accession
QCW23087.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MARYGSNDRLNLKVGVSSFSEEKTSLEVVGRIGVNTDSAMQDLDVRGNVYISGSIGIGTSTPSDAVDVNNTNVINVGVVTANEYYGSGLGLTGITSAANATNIYGGTAGQILYQAQPGITSAFENGITGYGLYSRGVGQPPQWLPVAPAGAIEGILIFDEGSSVGLGTTFSGLDFRGLDVVATGNNNGGIATVTISQQTYVAQAGVSTSVVGGAASVTQINVDVGISSFADFKITSSGVGATVGGSAGVVTYYGSGTELSGIVTSITAGDNISVDSSTGNVTITGLANTANVVADSLVVTGVSTLGIVTGLESFSLLLSISIKVLSSRIKK
Physico‐chemical
properties
protein length:331 AA
molecular weight: 33137,44720 Da
isoelectric point:4,33604
aromaticity:0,06042
hydropathy:0,30604

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW23087.1
1 331
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,9289
Central domain 71 304 235 0,1288
C-terminal 305 331 26 0,8889
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-304
C-terminal
305-331

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW23087.1 [NCBI]
Genbank nucleotide accession
MK799832 [NCBI]
CDS location
range 199815 -> 200810
strand -
CDS
ATGGCAAGATACGGAAGTAACGACCGTCTAAATCTAAAAGTTGGTGTCAGTTCTTTTAGTGAAGAGAAAACTTCACTAGAAGTAGTCGGACGTATCGGCGTGAATACAGATTCTGCGATGCAGGATCTAGACGTAAGAGGGAATGTTTATATTTCAGGAAGTATCGGCATTGGTACTTCAACACCATCTGATGCGGTAGATGTAAATAATACTAATGTAATTAACGTTGGTGTCGTTACCGCCAACGAGTATTATGGTTCTGGTCTGGGACTGACTGGAATCACAAGTGCCGCCAATGCAACGAATATTTACGGTGGTACTGCAGGACAGATATTATATCAGGCACAACCTGGTATCACTTCTGCATTTGAGAATGGAATAACTGGATATGGACTCTATTCGAGAGGAGTAGGACAACCTCCCCAATGGTTACCTGTTGCACCTGCAGGTGCTATTGAAGGTATTTTAATATTCGATGAAGGAAGTTCAGTAGGTCTTGGTACCACATTTAGTGGTCTTGATTTTAGAGGTTTAGATGTAGTAGCAACTGGTAATAATAACGGTGGTATTGCTACAGTCACAATTTCACAACAGACTTATGTAGCACAGGCGGGTGTATCCACAAGTGTAGTCGGTGGTGCAGCTTCTGTTACTCAAATCAATGTAGATGTAGGTATATCTTCATTCGCAGACTTTAAGATTACATCATCGGGTGTCGGTGCAACCGTTGGTGGTTCTGCTGGTGTTGTAACTTACTACGGTTCTGGTACTGAATTATCAGGTATTGTCACCTCAATCACAGCGGGTGATAATATTTCTGTTGACAGTTCAACAGGTAATGTCACAATTACTGGTCTTGCAAATACAGCAAATGTTGTTGCAGATTCATTAGTTGTTACTGGTGTATCTACTCTCGGTATCGTTACTGGTCTCGAATCATTCTCATTATTGCTAAGTATCAGTATCAAAGTTCTTTCGTCGCGGATCAAGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ebcfa6bd27c93fc750abd5d73cdd37859d844a79978fae40972ca7c6f9ed9e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5498
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank