Protein

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Genbank accession
ATS93422.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAMSSTSISPAQQAQADKRARDSAAAKKKADTEVKNAKSREDIQYTMFVSGLRRGRLNEFESKNQTDNLAILFDSVTNHSYTKEYNKSSYAVESKAKASDHVTTQDGKFSFSGIITDSPYLIDTRNVIDRDTDKDNPMLARRPAKAIEILELVADSHQLVTLVTEDNILTNYVITNFQVGRSAETGSSISVQINLEEFRFKKANKTVLARTADPKKAGNANTGTKQTADGGAVDDSAKQKRKTPYIGKNAETKERWENAAIGTTDFSGKPGAKLPFDPASLKRPQ
Physico‐chemical
properties
protein length:285 AA
molecular weight: 31319,55550 Da
isoelectric point:9,31344
aromaticity:0,06316
hydropathy:-0,75228

Domains

Domains [InterPro]
DC_0402
ATT
14–70
DC_0402 IPR048494
DC_0628
STR
54–275
DC_0628
ATS93422.1
1 285
Architecture
ATT
STR
ATT 14-208 | STR 209-275 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_I
[NCBI] 		2041488 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS93422.1 [NCBI]
Genbank nucleotide accession
MF979560.1 [NCBI]
CDS location
range 19744 -> 20601
strand +
CDS
ATGGCTATGAGTAGCACTTCCATTTCCCCTGCCCAGCAGGCGCAGGCAGATAAGCGAGCGCGTGATTCCGCTGCCGCCAAGAAAAAGGCGGACACGGAGGTAAAAAACGCCAAGTCTCGTGAAGATATTCAATACACGATGTTCGTTTCTGGCCTGCGTCGTGGTCGCCTTAATGAGTTCGAGAGCAAGAACCAGACGGATAATCTTGCTATCCTCTTTGACTCTGTTACTAATCATTCTTACACAAAAGAATATAACAAGTCAAGTTATGCAGTGGAGTCAAAGGCAAAAGCCTCTGACCACGTAACGACGCAGGACGGCAAGTTCAGTTTTTCTGGGATCATCACGGATTCACCTTACCTTATCGACACCCGAAACGTTATTGATAGGGACACCGACAAGGATAATCCGATGCTTGCCCGCCGCCCGGCAAAGGCTATTGAAATCCTCGAACTTGTCGCAGATTCCCACCAACTCGTTACCCTCGTGACAGAGGATAACATCCTAACCAACTACGTCATCACAAACTTTCAAGTAGGTCGTAGTGCAGAAACAGGATCTTCAATCAGTGTTCAGATTAACCTTGAAGAGTTCCGTTTCAAAAAAGCAAACAAAACTGTTTTGGCCCGGACAGCAGATCCAAAAAAGGCGGGTAATGCAAACACAGGCACGAAACAAACTGCCGATGGTGGGGCTGTGGATGACAGTGCCAAGCAGAAGCGTAAAACACCGTATATCGGTAAGAACGCTGAGACCAAAGAGCGTTGGGAAAACGCCGCCATTGGTACGACAGATTTCTCCGGAAAACCAGGTGCCAAACTTCCATTTGACCCTGCATCACTGAAGAGACCCCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7b5ab04a47cf81a7060c6dc40019c777dee775934dbd24ade1ac36da3e3f24a8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_I) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank