Protein

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Genbank accession
YP_009843453.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQISKYNLDQQELNTRLTGIDSSIKSNTDAIGNINTAIGSINSTLNTKAAKGANNDITELNALTKAITVAQGGTGASTAENARANLELNRFKQFPGETLVYSPYATNYLTVGEGTTWGVYSTASGTFIPLPIQSGGTGASTPAEALTKLLDGKPLALAADGQAPYDAVTVRQLANISGGGGASMSGVMNNRIGAVEWFNGNRTNLPAGYIPADGQLVSRTDAKTADLWSAVSSGLFYAVSDALWINSGDPNRPSAWRASYSTGDGSTTFRVPDLNGTQLNSIKHLFLSGSSGATNEPSANQVWNQTAPNITGTFYTHGSNADAADAMGAFYLNAQDTGSSFTVGGSDKGDHLGFSASRSNKTYGRGPAYQSDPGGTGPIGDLYPNHATGIWIIRANGSFNAANTDFSSINADASAPAVSTTVLGGKLTSQYRVGTTDAYRMRMYAQGAYARNLVGVIAVENQLVSEIDVAHFNFGLDGAIRLGRATGGSATPLAYGYTPFRAQDWWNTSLYGAFVPIVGGGTGGPGGAWRSYTALGTLTMGSDINAHPNAMLTQCWDYDLSTGESPSGNAVRNTIFNGTSYDITFGDNAGTVNYIFSKSPVSDRNKKKDIESLSTSIALENIKQMEYTSFKYIYDKGNQVRRGFIAQQLEEIDSQYVRKYESSDGSTSLALDENVLLLDALAAIQNLSNQIEELKLQIAELKAK
Physico‐chemical
properties
protein length:747 AA
molecular weight: 78776,21080 Da
isoelectric point:5,29912
aromaticity:0,08835
hydropathy:-0,25770

Domains

Domains [InterPro]
DC_0017
STR
1–747
DC_0017
IPR030392
CHP
645–700
IPR030392 Coil
IPR030392
CHP
645–741
IPR030392
YP_009843453.1
1 747
Architecture
STR
STR 1-747
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009843453.1
1 747
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,9765
Central domain 133 331 200 0,1212
C-terminal 332 747 415 0,8767
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-331
C-terminal
332-747

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HdH2
[NCBI] 		2508174 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus HdH2
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009843453.1 [NCBI]
Genbank nucleotide accession
NC_048748 [NCBI]
CDS location
range 80695 -> 82938
strand -
CDS
ATGTCACGTAATTTAATGCCAAAAAGTGGGGCTATGGCCCCCTATGTTGTAGTTAATAGAGACGCCGCAGTTGCCGGCGTTTTCTCTGTTGATGGAGAAGCTGGTGCTGTCGTACTAACATCCAAATATCTACAAATTTCTAAATATAACTTAGATCAGCAAGAACTTAATACGCGTTTAACTGGTATTGATAGCTCTATCAAAAGTAACACTGATGCTATTGGGAATATTAATACTGCAATTGGTAGTATTAATAGTACTCTTAACACTAAAGCTGCTAAAGGTGCTAATAACGATATTACTGAACTAAACGCACTTACTAAGGCTATTACGGTTGCTCAGGGTGGTACAGGGGCTAGCACTGCGGAAAATGCTAGAGCTAACTTAGAGCTTAATAGGTTTAAGCAGTTCCCCGGTGAAACTCTAGTATATAGTCCTTATGCGACAAACTATCTTACTGTTGGTGAAGGTACTACATGGGGAGTTTATAGCACAGCTTCTGGTACATTTATACCTTTACCTATTCAATCTGGTGGTACCGGTGCTAGTACTCCTGCGGAGGCCTTAACTAAGCTGCTAGATGGTAAACCTCTAGCATTAGCCGCCGATGGTCAAGCACCTTATGATGCTGTTACTGTTCGTCAGCTAGCTAATATCTCAGGAGGAGGTGGTGCTAGCATGAGTGGAGTTATGAATAACCGTATTGGTGCTGTTGAATGGTTCAATGGTAACCGTACTAACCTGCCAGCCGGCTATATACCAGCAGATGGTCAGTTAGTTAGCCGTACTGATGCTAAAACAGCAGATCTATGGTCTGCGGTATCTAGTGGTCTATTTTACGCTGTTTCCGACGCTTTATGGATTAATAGTGGGGATCCTAATAGACCTAGCGCTTGGAGAGCTTCCTACTCTACTGGTGATGGTTCTACTACTTTCCGAGTTCCTGATCTTAATGGTACACAGTTAAATAGTATTAAGCATCTATTCTTATCTGGTAGTTCTGGAGCCACTAATGAACCGTCTGCTAATCAGGTGTGGAATCAGACTGCCCCCAATATTACTGGTACTTTCTATACTCATGGTAGTAACGCTGATGCTGCAGATGCCATGGGGGCTTTTTATTTAAATGCTCAAGATACAGGTAGTTCCTTTACTGTAGGAGGTTCAGATAAGGGAGACCACTTAGGATTTTCGGCCTCTAGAAGTAACAAGACATATGGACGTGGTCCTGCTTACCAATCAGACCCCGGCGGTACTGGCCCTATTGGTGACCTATACCCTAACCATGCAACAGGTATTTGGATTATCCGTGCTAATGGTTCTTTTAATGCTGCTAATACAGACTTTTCTTCTATTAATGCTGATGCCTCGGCTCCTGCAGTTAGTACAACTGTATTAGGTGGTAAACTAACCTCTCAATACAGAGTGGGTACAACAGATGCCTATAGGATGCGTATGTATGCTCAAGGTGCCTATGCACGAAACTTAGTGGGTGTTATAGCTGTAGAAAACCAATTAGTAAGTGAGATAGATGTGGCCCACTTTAATTTCGGGTTAGACGGTGCAATTAGACTGGGAAGAGCTACAGGGGGTTCTGCAACTCCTTTAGCTTATGGGTACACTCCTTTTAGAGCACAAGATTGGTGGAATACTTCCCTCTATGGAGCTTTTGTCCCTATTGTTGGTGGAGGTACAGGAGGGCCTGGAGGCGCTTGGAGAAGCTATACGGCTCTAGGTACACTTACTATGGGGAGTGATATTAACGCCCACCCAAATGCAATGCTTACGCAATGCTGGGATTACGATCTTAGTACGGGGGAATCCCCTAGTGGTAACGCTGTTAGAAATACTATCTTTAATGGTACTAGTTATGATATTACTTTTGGTGATAATGCAGGTACTGTTAACTATATATTTAGTAAGTCCCCAGTTTCAGATCGTAATAAGAAAAAGGATATTGAATCCTTAAGTACTTCCATTGCTCTGGAGAATATTAAGCAGATGGAGTATACCTCATTTAAGTACATATATGATAAAGGGAATCAGGTACGTAGAGGTTTTATCGCGCAACAACTAGAGGAGATTGATAGTCAATATGTAAGAAAATACGAATCTTCCGACGGTTCTACTTCTCTGGCCCTAGATGAGAATGTGCTTCTATTAGATGCTCTAGCGGCAATTCAAAATCTAAGCAATCAGATAGAGGAGCTAAAACTTCAGATAGCTGAGTTAAAGGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d9f323e4521de37023b99d3a8b8382afc80579bdb7d2c38d9d5de92c9990996
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6305
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank