Protein

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Genbank accession
YP_009877697.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MAIPSFLNFLEESKQLDEAFNSSPYELTFGKKNAGDIFFTFVDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGVTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMQGITWDDPDKVGDVPVQNSVDSVVGGTGQTIIVGIDFRSEMENLNISVSGNEVSVMDGRKLVVSFTDPETARIISGMKTPSAAITNFMQKTNPGRYTGNIKVNSTSTRSGKKYEFIASDSSGKQLFNLNVEDSRETNLTPADMKTLPKTGSMDDLRNQGYIARILGIVDTYAPQQVGMYAGEKLTRIGAGKYRTSGGLDIQVYFWGIVNGKLSVEVVSDLSGHDQLMLEGDVKNAAYEIVGAISRAADSQFAGEVECRVVPINNAPYPIQKISRSQGYSYVDCGSFTLKIADALLNRFTLGKAVKLDLMKEFPRTTFKVRYDWRGKDTLLVQSSGERTIFGEINTNSSENAVITANIKVPSNAKFFGETVHGFSVAWDFQFPAGSKLQAARFVTNVTYDFDRNKANITTMLTENGRNVVDSNGYDISLSVKSVQDALDEISRRLKDAASQLSHLSSSNYNPNNLFLNDITVSKFGAIMFQDKDLAQSRNRTAVIDALARAKDQAAGGKNAGDLATYAGSIRDSAPNGRDLDWQVYTASNGTVLNVAWDITFRRNTTEGAYREFKDQINRANQYLQTVYNDAKSKGYNPTEPNLMTLERARQSDEWAVSNGDSAYSEYEQSLGGNLQISLK
Physico‐chemical
properties
protein length:805 AA
molecular weight: 88969,08790 Da
isoelectric point:8,34100
aromaticity:0,09317
hydropathy:-0,40236

Domains

Domains [InterPro]
DC_0099
STR
1–805
DC_0099
Coil
Unmapped
605–625
Coil
YP_009877697.1
1 805
Architecture
STR
STR 1-805
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009877697.1
1 805
Domain Start End Length (AA) Confidence
N-terminal 1 512 512 0,7198
Central domain 513 783 272 0,8153
C-terminal 784 805 21 0,4878
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-512
Central
513-783
C-terminal
784-805

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SP1
[NCBI] 		2025818 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009877697.1 [NCBI]
Genbank nucleotide accession
NC_049396 [NCBI]
CDS location
range 55905 -> 58322
strand -
CDS
ATGGCCATCCCATCTTTCTTGAACTTTCTTGAAGAGTCTAAACAATTAGACGAAGCGTTTAACTCATCCCCGTATGAATTGACATTCGGCAAGAAGAACGCTGGTGACATTTTCTTCACATTTGTTGATGAAGACGAAAAAGAATTCCGTATTCAATTCTATACCCCACAAGGTCTAGGCAAGAATGTTCGCCAAGTCTTTATCGGTCAGAAGCGTGGTTCCACATATCCCGATGCCATCGGTCGTTTCAAAAACCCAATGCGTGTCATCGCATCCATGATTGAAGCAACAAAGCAATTCATGGCGACGCCTTTGGGGAAAACCATTGACGGCTTTGCAATTAACTTCTCCAAGAAAGCATTGGAACGTGGTGTTACCCTCCTGCCGAAGATCATCCGTCAGTCCGGCCTGAAGCAGAAGCTCAATGTCATGGACCTGACGTATACCCCTATCCCTGATCGTGCATTCGTATGGGTTGTGCGTAAAGGCAAGGATCCTGCTCAGGTATTTGACGGTCCGAAGATGCAGGGCATTACCTGGGATGATCCAGACAAGGTGGGTGACGTTCCGGTTCAGAACAGCGTTGATAGCGTTGTGGGTGGAACTGGCCAAACTATTATTGTTGGCATCGATTTCCGTTCTGAAATGGAAAACTTGAATATTTCAGTTTCTGGAAATGAAGTATCGGTAATGGATGGGCGTAAATTGGTGGTGTCTTTCACTGATCCGGAGACAGCTAGAATCATTTCTGGGATGAAAACCCCTTCTGCTGCAATTACCAATTTCATGCAAAAAACGAATCCAGGAAGATACACTGGAAACATCAAAGTTAACAGCACGAGTACCCGCAGTGGCAAGAAATATGAATTTATTGCTTCCGACTCATCTGGGAAACAATTGTTCAATCTAAACGTAGAAGATTCTAGAGAAACAAACTTGACACCCGCCGACATGAAAACTCTCCCAAAAACCGGTTCTATGGATGATCTGCGCAACCAGGGTTATATCGCCCGCATCTTGGGTATCGTTGATACATATGCTCCACAACAGGTCGGTATGTATGCAGGTGAGAAACTAACACGAATCGGTGCGGGCAAATATCGTACTTCGGGTGGTCTGGACATTCAGGTTTATTTCTGGGGAATTGTCAACGGAAAACTTTCTGTAGAAGTAGTATCAGATTTGTCTGGTCATGACCAACTTATGCTGGAAGGAGACGTGAAAAACGCCGCTTATGAAATAGTGGGCGCAATCTCCCGTGCAGCCGATTCTCAATTTGCTGGAGAAGTAGAATGCCGTGTGGTTCCTATCAATAACGCCCCATATCCGATTCAAAAAATTTCCCGTTCCCAGGGATATTCTTACGTTGATTGTGGTTCTTTCACATTGAAGATCGCTGACGCTCTGCTGAATCGGTTTACCTTGGGCAAGGCGGTCAAACTTGATCTGATGAAAGAGTTTCCTCGTACAACATTCAAAGTCCGCTATGATTGGCGTGGAAAAGATACTCTGTTGGTTCAATCTTCCGGCGAGCGTACTATCTTTGGTGAAATCAACACCAATTCCAGTGAAAATGCAGTGATCACTGCAAACATCAAAGTACCAAGCAACGCTAAATTTTTTGGTGAAACCGTTCATGGCTTCTCTGTGGCGTGGGATTTCCAGTTCCCTGCTGGCAGCAAGTTGCAAGCCGCAAGATTCGTTACCAACGTAACTTACGATTTTGATCGAAACAAAGCCAACATCACCACCATGTTGACCGAAAATGGTCGAAATGTAGTAGACAGCAATGGATATGATATTTCGTTGTCTGTCAAATCAGTGCAAGATGCGTTAGACGAGATTTCTCGTCGCTTGAAAGACGCGGCTTCGCAACTGAGCCACCTCAGTTCATCAAACTATAACCCTAACAATCTATTCCTGAATGACATCACTGTCAGTAAATTTGGTGCGATTATGTTCCAAGACAAAGATTTGGCACAGTCCAGGAACCGCACAGCAGTCATTGATGCTCTGGCTCGGGCTAAAGATCAGGCTGCTGGAGGTAAGAATGCAGGTGATCTGGCCACCTATGCCGGATCCATTCGTGATAGCGCTCCTAATGGACGAGATCTGGATTGGCAGGTATACACAGCCAGTAATGGTACAGTTCTGAATGTTGCTTGGGATATCACTTTCCGTCGCAATACGACCGAAGGAGCATATCGTGAATTCAAGGATCAGATAAACCGTGCCAACCAATACCTGCAAACGGTATACAACGACGCGAAATCTAAAGGCTATAATCCTACCGAGCCAAATCTCATGACTCTTGAACGCGCTCGCCAATCCGACGAATGGGCTGTGAGTAATGGTGATAGTGCATACAGTGAATATGAACAATCGCTGGGTGGTAATCTTCAGATTAGTCTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8c1ff33425d57adb0057405d00384ee817181a80ce5433cd04e39c67bcb6d6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4042
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SP1 Infecting Salmonella Pullorum Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-09-15 — GenBank