Protein

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Genbank accession
ASU00817.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MPLIFANDLDLNGHKAINAADGTNPQDYVTRSQLDANSTSDRNRANHTGTQLASTISNFTAAVQAIQWASMAPPTGTVNLNSQRIENLADPVNPQDAATKAYVDNAIGGSLEGLQFKGSAAVVHTGANVNVAAPASATFDAVVVSTGEVVILDSQTTGTEDGAWTFNGTGTPMTRPDNFSDTTPDALVGSFWLVERGTSADLFAVMTNDSFTLGTDEPDFVIRGGAGGTDDDESFSQNVGTGSAGPYTVTHNLGSTDIDVIVRELTGDYRIIVAWKPTDANTVSIEPDETWATNSHRATVVKVV
Physico‐chemical
properties
protein length:304 AA
molecular weight: 31868,37380 Da
isoelectric point:4,23316
aromaticity:0,06579
hydropathy:-0,22928

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Nocardia phage NTR1
[NCBI] 		2026083 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Nocardia transvalensis
[NCBI] 		37333 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASU00817.1 [NCBI]
Genbank nucleotide accession
MF477236 [NCBI]
CDS location
range 41442 -> 42356
strand +
CDS
ATGCCCCTGATCTTCGCCAACGACCTGGACCTCAACGGCCATAAGGCGATCAACGCCGCCGATGGGACGAACCCCCAGGACTACGTGACGCGCTCCCAGCTCGACGCGAACTCCACGTCGGACCGGAACCGCGCGAACCACACCGGCACGCAGCTCGCCTCCACGATCTCGAACTTCACCGCCGCCGTGCAGGCCATCCAGTGGGCGAGCATGGCTCCGCCCACCGGCACCGTGAACCTGAACAGCCAGCGGATCGAGAACCTGGCCGACCCGGTGAACCCGCAGGACGCGGCCACCAAGGCGTACGTGGACAACGCGATCGGAGGCAGCCTGGAGGGGTTGCAGTTCAAGGGCTCCGCCGCCGTGGTCCACACGGGCGCGAACGTGAACGTGGCAGCCCCCGCCTCCGCCACGTTCGACGCCGTGGTGGTGAGCACCGGCGAGGTCGTCATCCTGGACAGCCAGACCACCGGCACGGAGGACGGGGCCTGGACCTTCAACGGCACCGGTACTCCGATGACGCGGCCGGACAACTTCTCGGACACCACGCCGGACGCGCTCGTCGGTTCCTTCTGGCTGGTCGAGCGCGGGACCTCCGCCGACCTGTTCGCCGTGATGACGAACGACTCCTTCACGCTCGGCACCGACGAACCTGACTTCGTGATCCGGGGCGGAGCCGGAGGCACGGACGATGACGAGTCGTTCTCGCAGAACGTGGGCACCGGCTCGGCCGGTCCATACACGGTGACCCACAACCTCGGCTCCACCGACATCGACGTGATCGTGCGGGAGCTGACCGGCGACTACCGGATCATCGTGGCCTGGAAGCCGACCGACGCGAACACGGTGAGCATCGAGCCGGACGAGACCTGGGCCACCAACTCGCACCGGGCGACCGTGGTGAAGGTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
031c32c19b535a6f556c1c9b8d602974ec4b362a2437f8b37cbf85c668c55cfb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8447
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of bacteriophage NTR1 which infects Nocardia transvalensis Taylor,S. and Petrovski,S. 2018-12-17 — GenBank