Protein

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Genbank accession
YP_009799418.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,51
Protein sequence
MALISQAIKNLKGGISQQPDILRYPDQGSRQVNGWSSESEGLQKRPPMVFIKTLGDQAALGKSPYIHLINRDEYERYYVVFTGSGIRVFDLAGNEKAVRYSANKSYITTATPREDLRMVTVADYTFIVNRNYTVASGGSINMHGFNPKQDALINVRGGQYGRTLQVMINGGTQATYRIPNGDNPTHVQNTDAQWLAEELAKQLRVNLPAWSFTVGQGYIHIVAPAGQQIDSLVTKDGYADQLISPVTHYAQTFTKLPLNAPDGYIVKIVGDTAKSADQYYVKYDASRKVWSEVVGWNVEVNLRAETMPHALVRAADGNFEFKTLSWSDRKCGDNDTNPWPSFVDSTINDVFFFRNRLGFLTGENIVLSRTGKYFNFFPASVANLSDDDPIDVAVSVNRISILKYAVPFSEELLIWSDETQFVLTSAGTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSFTSISRYYAVQDVSSVKNAEDITAHVPNYIPNGVFAICGSGTENFCSVLTDGDPSKIFIYKFLYLNEELRQQSWSHWDFGPNVQVLACQAIGSDMYVVMRNQYNTFMSRISFTKNAIDIVGEPYRAYLDFKVAYTIPAGTYNDDTYETTINLSTIYGARFDRGEVTLLEPDGRSHTFEDPDGGWANEPLIRLTGNMEGKRVFLGFNFAFVYEFSKFLIKQTADDGSTATEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGGRLGSNSLRASKLNLGTGQYRFPVAGNAKFTTVFITSDEATPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:793 AA
molecular weight: 88698,24550 Da
isoelectric point:5,67886
aromaticity:0,12232
hydropathy:-0,31665

Domains

Domains [InterPro]
IPR058003
TTP
1–793
IPR058003
YP_009799418.1
1 793
Architecture
TTP
TTP 1-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009799418.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9925
Central domain 142 347 207 0,2001
C-terminal 348 793 445 0,2061
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-347
C-terminal
348-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Ebrios
[NCBI] 		2099356 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ebriosvirus
Host Escherichia coli C
[NCBI] 		498388 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009799418.1 [NCBI]
Genbank nucleotide accession
NC_047942 [NCBI]
CDS location
range 24322 -> 26703
strand +
CDS
ATGGCTCTAATTTCTCAAGCCATTAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGCTATCCCGACCAAGGCTCTCGCCAAGTCAATGGGTGGTCTTCGGAGTCTGAGGGTCTTCAAAAGCGCCCTCCTATGGTGTTCATCAAGACCCTTGGCGACCAAGCCGCTTTGGGTAAGTCTCCGTACATCCACTTGATTAACCGTGACGAATACGAGCGGTACTACGTTGTGTTCACTGGTAGCGGTATCCGAGTGTTCGACCTTGCTGGTAACGAGAAGGCTGTCCGGTACAGCGCGAACAAATCATACATCACCACGGCCACTCCAAGGGAAGACCTTCGGATGGTAACGGTGGCTGACTACACGTTCATCGTGAACAGGAACTACACTGTTGCTTCCGGCGGTTCCATCAACATGCACGGGTTCAACCCTAAGCAGGACGCCTTGATTAACGTTCGAGGTGGCCAGTATGGACGAACTCTGCAAGTGATGATTAACGGTGGCACTCAGGCGACCTACCGGATTCCAAATGGTGACAACCCTACGCACGTTCAGAATACCGATGCCCAATGGCTGGCAGAGGAGCTAGCCAAACAGTTGCGAGTCAACCTCCCTGCGTGGTCATTCACAGTCGGCCAAGGGTACATCCACATCGTGGCCCCTGCTGGTCAACAGATTGATTCCCTTGTGACGAAGGATGGTTACGCTGACCAGCTAATCAGTCCCGTGACTCACTACGCCCAGACCTTCACTAAGTTGCCGCTCAACGCTCCCGATGGGTACATCGTGAAGATTGTTGGGGACACCGCTAAGTCTGCCGACCAGTATTACGTGAAGTACGATGCGTCCCGTAAGGTCTGGTCTGAGGTTGTTGGGTGGAACGTGGAGGTTAACCTTCGGGCCGAGACGATGCCACATGCGCTCGTTCGGGCTGCTGATGGTAACTTCGAGTTCAAGACGCTGAGCTGGTCTGACCGGAAGTGCGGTGACAACGACACTAACCCGTGGCCCTCATTTGTTGACTCGACCATCAACGATGTGTTCTTCTTCCGTAACCGTCTGGGCTTCCTGACTGGCGAGAACATCGTGCTCAGTCGAACCGGTAAATACTTCAACTTCTTCCCTGCGTCCGTTGCGAACCTTAGCGATGATGACCCGATTGACGTTGCTGTGAGTGTGAACCGGATTTCCATCTTGAAGTACGCCGTTCCGTTCTCTGAGGAGCTGCTGATTTGGTCTGACGAGACTCAGTTCGTGTTGACCTCTGCGGGAACCTTAACGTCCCGTTCGGTTGAGCTGAACCTGACCACTCAGTTCGATGTGCAAGACCGAGCTCGTCCCTACGGGATTGGTCGTAACGTGTACTTTGCGAGCCCACGGTCTAGCTTTACGTCCATCAGCCGTTACTATGCGGTGCAGGATGTAAGTTCCGTGAAGAACGCCGAGGACATTACCGCCCACGTCCCGAACTACATCCCGAATGGTGTGTTCGCCATCTGTGGCTCTGGAACCGAGAACTTCTGCTCAGTGCTGACCGATGGAGACCCTAGCAAGATTTTCATCTACAAGTTCCTGTACCTCAACGAGGAGCTTCGCCAACAGTCTTGGTCTCACTGGGACTTTGGGCCGAACGTTCAGGTACTCGCTTGTCAAGCTATCGGGTCTGACATGTACGTGGTGATGCGGAACCAATATAACACCTTTATGTCTCGAATATCTTTCACTAAGAACGCCATCGACATCGTTGGGGAGCCTTACCGAGCCTATCTGGACTTCAAGGTTGCCTACACGATTCCCGCTGGTACTTACAACGATGATACCTACGAGACAACAATCAATCTCTCGACCATCTACGGTGCTCGTTTTGACCGTGGTGAGGTGACTCTTCTGGAGCCTGATGGTCGTTCCCACACCTTTGAAGACCCCGATGGCGGCTGGGCCAATGAGCCGCTGATTCGCCTAACGGGTAACATGGAGGGCAAGAGGGTGTTCCTTGGTTTCAACTTCGCGTTCGTCTATGAGTTCTCGAAGTTCCTCATTAAGCAGACCGCCGATGACGGTTCAACCGCTACCGAGGACATTGGGCGACTCCAACTGCGAAGGGCATGGGTGAACTACGAGGACTCTGGCACCTTCGACATCTACGTGGAGAACCAATCGTCAAACTGGAAGTACACGATGGCTGGTGGCCGCTTGGGCTCCAACTCGCTGAGGGCCAGTAAGTTGAACCTTGGCACGGGCCAGTACCGATTCCCTGTAGCGGGGAACGCCAAGTTCACTACGGTCTTCATCACGTCTGACGAGGCCACACCGCTGAACGTTATCGGCTGTGGCTGGGAAGGCAACTACCTGCGCCGGAGTTCCGGCATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c0a3d8001e008a477861408d6b2dd0674344d216e3bcf0c8590bff9827483d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9157
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Ebrios, a novel T7-like phage isolated from the Lagoon Ebrie in Abidjan Ngazoa-Kakou,S., Philippe,C., Tremblay,D.M., Loignon,S., Koudou,A., Abole,A., Coulibaly,D.N., Kan Kouassi,S., Kouame-Sina,M., Aoussi,S., Dosso,M. and Moineau,S. 2018-06-21 — GenBank