Protein

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Genbank accession
APD20650.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAEPILMAAFGEDFVETRILSEANSVKYWLKAYATHSNAVPNKPELNINGAFDMTSSLRRGINVVQVNGNSFINFKTFDVTTDDNNANNKAFVEYANGLTSGLYIIMTHERFQSSPLIDRWFKNKWSASWPGSDFSKSFPNSAYVGVLGAAKGRILIESFYGNDGVVKEDSRAKVDTVYDNVGDVGYTGCPYRSIEDTNEYSDSTGYEYKRYPVQNESISKIADYGLSPGDSVFLVCDMYASKSLLDAGSTTRASLRWFKGTSLLSSNVSLEVPKNGADRWLRFERFIAVPTDADGFTIVVSRYPKTSIVGDSKIKNLVFVQTSHSEKLNSVVQEFGVNGIRMNKGVEGGTTMIMELPNSKVDPSGVIPVQSFRETSD
Physico‐chemical
properties
protein length:378 AA
molecular weight: 41776,27710 Da
isoelectric point:5,46879
aromaticity:0,11111
hydropathy:-0,31270

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APD20650.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 65 65 0,4837
Central domain 66 264 200 0,4839
C-terminal 265 378 113 0,4898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-65
Central
66-264
C-terminal
265-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KPV15
[NCBI] 		1913572 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Jiaodavirus
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD20650.1 [NCBI]
Genbank nucleotide accession
KY000080 [NCBI]
CDS location
range 160448 -> 161584
strand +
CDS
ATGGCTGAACCAATTTTAATGGCAGCCTTCGGCGAGGATTTCGTGGAAACACGAATCCTCTCTGAGGCAAACTCTGTGAAGTATTGGCTAAAAGCTTATGCTACACATTCTAATGCTGTTCCTAATAAGCCAGAATTGAATATTAATGGTGCCTTTGATATGACCTCCTCCTTACGGAGGGGGATTAATGTCGTTCAGGTTAACGGCAATAGTTTTATTAACTTTAAAACTTTTGATGTTACCACTGATGATAACAACGCTAATAACAAAGCGTTTGTAGAATATGCAAATGGATTAACTTCGGGATTGTATATTATAATGACGCATGAACGATTTCAGTCTAGTCCGTTGATAGATAGATGGTTTAAAAACAAGTGGTCTGCTTCTTGGCCAGGTTCTGACTTTTCTAAATCATTTCCAAACTCCGCCTATGTTGGAGTGCTCGGAGCAGCAAAAGGACGTATATTAATTGAGTCATTTTACGGAAATGATGGCGTAGTCAAAGAAGATTCCAGAGCTAAAGTCGATACAGTGTATGATAACGTTGGCGATGTAGGATATACAGGCTGCCCTTATCGTTCTATTGAAGATACCAATGAATACTCGGATTCTACTGGATATGAATATAAGCGATACCCAGTACAAAATGAATCTATAAGCAAAATAGCTGATTATGGATTATCTCCTGGGGATTCAGTGTTTTTAGTGTGTGATATGTATGCATCTAAAAGCCTTCTTGATGCGGGTTCTACAACTAGAGCTAGCTTGCGATGGTTCAAGGGTACATCTTTGTTATCTTCAAACGTATCATTAGAAGTTCCAAAAAATGGAGCTGACAGGTGGCTAAGATTTGAAAGATTTATCGCTGTTCCTACAGACGCTGATGGATTTACTATCGTGGTATCACGATATCCAAAAACGTCCATAGTTGGTGACTCTAAAATCAAAAACCTTGTATTTGTTCAAACCTCTCATAGCGAAAAACTGAATAGCGTTGTTCAAGAATTTGGTGTGAATGGCATAAGAATGAATAAAGGCGTTGAAGGAGGAACCACTATGATTATGGAACTTCCAAATTCAAAAGTCGATCCGAGCGGTGTTATTCCAGTTCAATCGTTCAGAGAAACATCAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
580ffefbbac2f5cfd2662ed77b1853eec7f0b5b13dbe6890db8dc146913befd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for prophylaxis and treatment of hospital infections (variants), strains of bacteriophages, used for obtaining thereof Aleshkin,A.V., Volozhantsev,N.V., Verevkin,V.V., Krasilnikova,V.M., Myakinina,V.P., Popova,A.V. and Svetoch,E.A. 2016-10 — GenBank