Protein

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Genbank accession
AUR98593.1 [GenBank]
Protein name
head-closure protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPVTKPIQTSFNMGVLSPEMMARTDIEQYYRGAKTIKNGVVLPQGGITKRNGFKYLAALDIKSTSAYFNNAGGLVRVLPYLSNEETFLVVISATGMLSVMTERGSIVQVSEPSVSTAADSIDISHRLFGDAIEDAQYKQITNDLVILTEYSTPFVLIKKSPELFEIKDIPNLKVPKSEYLDKFDAGTSRWEQVLITFEGVENGDAFSIGISTAAGTPTNATDFIYSVTAEPLDGSTTNAGDNADAMATNLGTALGATAKAVYEVTPRQVIKESDGSLVNVNLRTFAGIELTRTTAIKHDPMFCVSKARHESRIKCKPIKQPKTLSATEELPSWDVNRGFPSVAGEFGGRFVLAGTSDQPETIWMSRIYQYYDFTPDATPVATSPIEVTLATEKASRITGIIDSRRLTIFTNKTAYILGGAGEDVITPDTVRAQNIRIQGSKRIRPESLDDVICYVQQSGAELNSTSYEFASDSYITSQSSIYSAHLLKDVRQMSKTISDQQFNAEYLTCLNIDGTMANYSSLKEQELRNWTEFTTQGEVVDLVGVRANNFALIRRGIDGKEIITLEKMTTEASYCDQAQDYFSSVPFDKIGGFQHLTGETLVAIADGYDFDLIVDSNGYVTFPFKASKATVGLPFDFEVEPMPVNVEFQSGSIVNTRKRINQVRVSALNSRDVTLEYAGRDYAIADRHVGFKLGEPPQPYTGVKTLRLTGWINQGSVKIKSNRPVGVTVLGLEMKVRAKG
Physico‐chemical
properties
protein length:740 AA
molecular weight: 81224,88670 Da
isoelectric point:5,33959
aromaticity:0,08649
hydropathy:-0,20811

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR98593.1
1 740
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9734
Central domain 176 374 200 0,4698
C-terminal 375 740 365 0,1389
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-374
C-terminal
375-740

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.254.O._10N.286.45.C8
[NCBI] 		1881356 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98593.1 [NCBI]
Genbank nucleotide accession
MG592620 [NCBI]
CDS location
range 7220 -> 9442
strand +
CDS
ATGCCAGTAACCAAGCCAATACAAACCAGTTTTAATATGGGCGTGCTATCACCGGAAATGATGGCACGTACAGACATAGAGCAATATTACAGAGGTGCAAAGACCATTAAGAACGGTGTTGTGCTTCCTCAAGGTGGCATTACAAAGCGTAACGGCTTTAAGTACCTAGCGGCGTTGGACATAAAATCAACATCAGCATATTTCAATAACGCTGGTGGATTAGTTCGTGTGTTGCCTTATCTGAGTAATGAGGAGACATTCTTGGTTGTTATTTCCGCTACTGGAATGCTGTCAGTGATGACGGAGCGAGGATCAATAGTTCAAGTGAGCGAGCCGAGCGTGTCCACCGCCGCCGATAGTATCGACATAAGCCATAGATTGTTTGGTGATGCGATAGAAGATGCGCAATACAAGCAGATAACAAACGACCTAGTGATACTGACCGAGTACAGCACGCCGTTTGTTCTAATAAAGAAAAGCCCAGAACTATTTGAGATCAAAGACATCCCCAACTTAAAGGTGCCTAAATCCGAATATCTAGATAAGTTTGACGCTGGGACGAGTCGATGGGAGCAGGTATTAATAACCTTTGAGGGCGTCGAAAATGGTGATGCGTTTTCGATTGGCATATCAACCGCAGCAGGCACACCAACAAACGCAACAGACTTTATATACAGCGTGACAGCGGAGCCGCTAGACGGTAGTACAACAAACGCTGGTGATAATGCGGACGCAATGGCAACCAATCTTGGCACTGCGCTTGGGGCTACAGCAAAAGCAGTTTACGAAGTAACACCAAGACAGGTGATTAAAGAATCTGACGGCTCACTGGTAAATGTAAACCTACGCACGTTTGCAGGCATCGAGCTAACAAGAACAACCGCAATCAAACATGATCCAATGTTCTGTGTATCAAAGGCTCGCCATGAGTCGCGTATAAAGTGCAAGCCAATCAAGCAACCCAAGACATTATCAGCAACGGAAGAGCTGCCAAGCTGGGACGTTAACAGGGGCTTTCCATCGGTGGCGGGTGAGTTTGGCGGTAGATTTGTTTTAGCTGGTACGAGCGATCAACCGGAAACAATCTGGATGAGTCGCATTTATCAATATTACGACTTCACACCAGACGCAACACCAGTTGCAACCAGCCCAATAGAAGTGACGCTGGCAACGGAAAAGGCATCACGCATCACTGGGATTATTGATTCTAGACGACTAACCATATTCACAAACAAGACCGCATACATTCTCGGCGGTGCTGGTGAGGACGTAATAACACCAGATACAGTTCGAGCGCAAAACATACGCATTCAGGGTTCTAAGCGAATACGCCCAGAATCACTTGACGATGTGATCTGCTATGTGCAGCAATCAGGCGCAGAACTTAACAGCACTAGCTATGAGTTTGCGAGTGATTCCTACATCACCTCCCAAAGCTCTATCTATTCAGCGCATTTACTGAAAGACGTTAGGCAGATGTCAAAGACCATTTCAGACCAACAATTTAACGCGGAGTATTTAACTTGTCTGAACATAGATGGAACGATGGCTAACTACTCAAGCCTGAAAGAGCAAGAGCTAAGAAACTGGACAGAGTTTACAACTCAAGGCGAAGTGGTTGATCTGGTAGGTGTTCGAGCTAATAACTTTGCTTTGATTCGCAGGGGTATTGATGGAAAGGAAATCATAACCCTTGAGAAGATGACGACAGAGGCGAGCTATTGCGACCAAGCGCAGGATTATTTCTCAAGCGTACCGTTCGATAAGATTGGCGGATTTCAGCATTTAACAGGCGAAACGCTGGTGGCAATTGCTGACGGTTACGACTTTGATTTGATTGTTGATTCTAACGGGTATGTGACATTTCCATTCAAGGCGAGTAAAGCAACGGTTGGCTTGCCATTTGATTTTGAAGTCGAACCAATGCCAGTTAACGTTGAGTTTCAAAGCGGTTCAATTGTTAACACTCGCAAGCGAATAAATCAGGTGAGAGTTTCAGCGTTAAATAGTCGTGACGTTACGCTGGAGTATGCAGGGCGTGATTATGCAATCGCTGATCGTCATGTTGGATTTAAGCTTGGTGAACCACCGCAACCATATACAGGTGTTAAAACATTGCGTTTAACTGGATGGATTAATCAGGGTAGTGTTAAGATTAAATCAAATCGTCCGGTTGGTGTAACTGTGCTGGGCTTAGAAATGAAAGTAAGAGCTAAGGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
11e7534dfeb60c1c477806339f6231dd5d71535f99ca4694db042520f84b875f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7955
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank