Protein

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Genbank accession
YP_009205618.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
MAYYNGSAATFADLKTAIENACVANGWTLSNGILSKNGCFFQLVATTPQLTLQGGTGQTGSTLNGGPSNFVKVMSPTGTPIVFPINYEIHVMTSPEDEVYCVINYNADFYQQLSFGKSLISGIGGTGGWFTASYDSRVAQSGSGNQFDMNSGSNMDSGGTRGFWGMAGGLFFESTSGGSYTGNYFHCGLDAVGWYNTRGSNLGYTHCAGIINALPNQSNSATVLVPVKGIKTRGSGGLTIVVNPPNVRYCRIDNLEPGSLVTYGPDQWKVYPFYRKDLTQRNGSSSSVHSGTYGYAIKYTGS
Physico‐chemical
properties
protein length:302 AA
molecular weight: 32077,29050 Da
isoelectric point:7,57359
aromaticity:0,12252
hydropathy:-0,20132

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009205618.1
1 302
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2799
Central domain 11 202 193 0,0039
C-terminal 203 302 99 0,9992
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-202
C-terminal
203-302

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaMx42
[NCBI] 		1175662 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009205618.1 [NCBI]
Genbank nucleotide accession
NC_028879 [NCBI]
CDS location
range 18098 -> 19006
strand +
CDS
ATGGCCTACTATAACGGAAGCGCCGCGACTTTCGCGGATTTGAAAACCGCCATCGAAAATGCCTGCGTCGCTAACGGCTGGACGCTTTCAAACGGTATTCTTTCGAAAAACGGTTGTTTCTTTCAACTTGTCGCAACGACGCCGCAACTTACGTTGCAAGGCGGAACAGGGCAGACGGGTTCAACGCTCAACGGCGGCCCGTCGAATTTCGTTAAAGTAATGTCGCCGACCGGAACGCCGATTGTTTTTCCGATCAATTACGAAATTCACGTAATGACTTCGCCAGAAGACGAAGTTTATTGCGTAATTAATTACAATGCTGATTTTTATCAACAATTGTCGTTCGGCAAATCGTTGATTTCCGGTATTGGGGGAACTGGCGGATGGTTTACAGCAAGCTATGATAGCCGCGTAGCTCAAAGCGGAAGCGGAAACCAATTCGATATGAATTCCGGTTCGAATATGGATTCGGGCGGGACGCGCGGTTTTTGGGGCATGGCTGGCGGTCTTTTCTTCGAAAGTACAAGCGGCGGAAGTTACACGGGTAATTATTTTCATTGCGGACTTGATGCCGTAGGCTGGTATAACACAAGGGGTTCAAACTTAGGTTATACGCATTGTGCCGGGATCATTAACGCATTGCCGAATCAATCGAATTCGGCAACAGTCCTTGTTCCAGTAAAAGGAATAAAAACACGCGGAAGCGGCGGACTTACAATCGTAGTCAATCCGCCAAATGTTCGATACTGTCGAATTGACAATTTGGAACCGGGAAGTTTGGTAACTTACGGCCCGGATCAATGGAAAGTTTATCCGTTTTATCGCAAAGACCTTACGCAGCGCAACGGTTCGTCAAGTTCTGTTCATAGCGGAACTTACGGATATGCCATTAAATACACCGGAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd2d13b68e81843b85aa97f7275b533bb2de6805c3db67c3e5f6e478653b0ba8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50