Protein

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Genbank accession
QQV89477.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MAKIPRIQFKRTKTPGTKPSKDILAEGELAINLADRTLFTKSGDDIIDLGFAKGGTVNGDINQETGNFTTNGSTSVKTHIDIKNSLNDNKIFRLSYEGDRGALLSVNEGDNKWKTILVPLDEDGTKTIATRQWVNTFVKSDTIQTDLKAPDNTTVLTINNSKLLSFKDGTTDIFAVDIKGGYMRNSLILSGQHDYPGITLQKNDTFKVRIETDKDSSKTLLTFAYRDSDNSSKFVIKIPKENGLLATQGWTDSKYYYRDSSNVAFREAITLSRASGPEKLIMEYNGANGQWRFAQSVDGSGNWMRHVLPTESGTIATRTWINNFLNRTGVDTYIQSADGKHWLTIVNDGMFSVWHNDTKQRSFYVETDGVAVAAHSVRAPGIMATRGASELIKLGFNATGSPFLSYYDANGKWTPYYFPSGTQGNVSTQEWVASNFYKKTETYNKSEIDGKVNGRLTQAQGDARYALSNLYQSEGGESRVWNGSKTYYLFTNNNANSGLYKHGTGYIWGFNASGQMTAGLIPIGCGGTGAKEAGAARANLSVYSKAETDGRYPLKNDVYAKSSTYSRAEVDSRVNGRLTQAQGDARYVQKSDAKTDIIFTTTRTILPTSESQHDSNPGYSISYFDPNELKGKLVKFMYYNTTTIGSGRHIGESGWQPYFGNGQVRYGKRGTHSRAVIAY
Physico‐chemical
properties
protein length:679 AA
molecular weight: 75026,47170 Da
isoelectric point:9,16684
aromaticity:0,10751
hydropathy:-0,59558

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQV89477.1
1 679
Domain Start End Length (AA) Confidence
N-terminal 1 351 351 0,3023
Central domain 352 550 200 0,2974
C-terminal 551 679 128 0,7629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-351
Central
352-550
C-terminal
551-679

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage SJ_PmiM
[NCBI] 		2797314 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQV89477.1 [NCBI]
Genbank nucleotide accession
MW367898 [NCBI]
CDS location
range 36168 -> 38207
strand -
CDS
ATGGCAAAAATTCCAAGAATACAATTTAAAAGAACTAAAACACCAGGAACAAAGCCTTCAAAAGATATTTTAGCTGAAGGTGAATTAGCAATTAACTTAGCTGATAGAACTCTTTTTACAAAATCCGGAGATGATATTATTGATCTTGGCTTTGCTAAAGGCGGCACAGTTAATGGAGATATTAATCAAGAAACTGGAAATTTTACAACCAATGGATCAACATCTGTTAAAACACACATTGATATAAAAAATAGCTTAAATGACAACAAAATATTTAGGCTTTCTTATGAAGGAGATCGTGGCGCTTTATTGTCTGTTAATGAAGGTGACAATAAATGGAAAACTATACTTGTTCCATTAGACGAAGATGGGACTAAAACTATAGCAACCCGTCAATGGGTCAATACTTTTGTTAAAAGTGACACTATTCAAACAGATTTAAAAGCTCCAGATAATACAACAGTTCTTACTATAAATAACTCAAAATTATTATCATTTAAAGATGGGACTACTGATATATTCGCTGTAGATATTAAAGGCGGGTATATGAGAAATTCATTAATACTATCCGGTCAACATGATTACCCTGGTATTACACTCCAAAAAAATGATACTTTTAAAGTTAGAATAGAAACTGACAAAGATTCTAGTAAGACTTTATTAACATTTGCTTATAGAGATTCTGACAATTCTAGTAAATTTGTTATAAAAATACCAAAAGAAAATGGGCTGTTAGCTACACAAGGCTGGACAGATAGCAAATACTATTATAGAGATTCAAGTAATGTCGCTTTTAGAGAAGCAATTACACTTTCAAGGGCTAGTGGTCCAGAAAAACTAATTATGGAATATAATGGTGCAAATGGACAATGGAGATTTGCACAATCTGTTGACGGATCAGGTAATTGGATGAGACATGTTTTACCAACAGAATCAGGAACTATTGCTACAAGAACTTGGATTAATAACTTTCTTAATAGAACAGGTGTAGATACTTATATTCAATCAGCGGATGGTAAACATTGGTTAACTATAGTAAATGATGGGATGTTTTCTGTATGGCACAATGATACAAAACAAAGAAGTTTTTACGTTGAAACTGATGGGGTTGCTGTAGCAGCACATTCTGTTAGAGCACCTGGTATAATGGCTACACGTGGCGCTTCAGAATTAATCAAACTAGGATTTAACGCAACAGGCTCTCCGTTTTTATCATATTATGACGCAAATGGTAAATGGACTCCATATTATTTTCCTAGTGGAACCCAAGGCAATGTATCTACCCAAGAATGGGTTGCTTCTAATTTTTATAAAAAAACAGAAACATATAATAAATCTGAAATTGATGGCAAAGTAAATGGACGTTTAACTCAAGCACAAGGTGATGCCAGATATGCACTATCCAATTTGTACCAAAGTGAAGGAGGTGAAAGCCGAGTATGGAATGGCTCAAAAACATATTATCTATTTACTAATAATAATGCAAATTCTGGATTATATAAACATGGTACTGGATATATATGGGGTTTTAATGCTAGTGGACAAATGACTGCTGGGCTTATACCTATTGGTTGTGGTGGTACAGGCGCAAAAGAAGCCGGTGCTGCTAGAGCAAATTTATCTGTATATTCAAAAGCCGAGACTGACGGAAGGTATCCTTTAAAAAATGATGTTTACGCTAAATCATCAACATATTCTAGAGCAGAAGTTGATTCTCGTGTAAATGGTAGATTAACTCAAGCACAAGGCGATGCACGATATGTTCAGAAATCAGACGCCAAAACTGATATAATATTTACAACAACTAGAACTATTCTTCCTACTAGTGAATCTCAACATGATTCGAATCCCGGCTATTCTATTAGTTATTTTGATCCAAATGAATTAAAAGGTAAACTAGTTAAGTTTATGTATTATAATACCACAACTATTGGTTCTGGTAGACACATTGGTGAATCTGGGTGGCAACCTTATTTTGGAAATGGTCAAGTTAGATACGGTAAACGGGGGACACATTCAAGAGCTGTTATTGCTTATTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e8c1037173c878d21350b4a7049de4ab34b9910d7710bb2147d19c623d84b27a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6413
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analyses of a novel bacteriophage (SJ_PmiM) within Myoviridae family infecting Proteus mirabilis Song,J., Ruan,H., Zhou,Z., Sun,D., Zheng,J. and Wu,R. 2022-05-19 — GenBank