Protein

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Genbank accession
YP_009200511.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MADLSRIKFKRSSVAGKRPLPADIAEGELAINLKDCMLFTKDDQNMIVDLGFAKGGNVDGNINQVSGNFKTAGNVEGKNFDITDSAKINNSTKTKYLTISTNDEPTSNGIYRYWGSATRGSVHEFGFADSSYGMYVQKSPTGDVDAAINGKLSIGTAGNAILNIGGLDDGDTGFTSGGDGLLHVRANNEYVMQFQSSVATVHKILRPNAGIETSYKGYGTYDFISLAQWADTPETANGVNHLRKMRGCAAGTIFHELVDQKNSEIAWYQGNGPEIKIVSWNSDGDLKANGSITALNGSFFSRASNAAYNANYWFHGESGQERAVIYAGANGQLRLRNQATGSGEMVFDGGMIQTLTMVSGSERALIRGTVDGGSHVAWRDRSSGIQLDCPNSDNVAYNIWKATKWGANHLAAMDVHAPAGDPNNVVIRLLSGNHVHNWNGPNYSSPGTIAAGGRLSTGAGVYAAGRVEGHDLVSRGEIYGAGGNVTIDTSGNILASAWETGNLKHELNTIRTAANNAQSTANTANATANNAQSTANTANANANAAARWVNWGTSYNFGLLNQTPNQRIIDKGWFLVGLAGAGQNNNTINLIGGRIQVWNNNSGWVDSST
Physico‐chemical
properties
protein length:609 AA
molecular weight: 64682,50020 Da
isoelectric point:6,36207
aromaticity:0,08210
hydropathy:-0,38949

Domains

Domains [InterPro]
DC_0468
STR
1–308
DC_0468 DC_1834
DC_0538
STR
265–460
DC_0538 IPR021793
YP_009200511.1
1 609
Architecture
STR
STR
STR 1-460 | STR 480-609
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_TG1
[NCBI] 		1589265 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tegunavirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009200511.1 [NCBI]
Genbank nucleotide accession
NC_028820 [NCBI]
CDS location
range 153635 -> 155464
strand +
CDS
ATGGCCGATTTATCAAGAATTAAATTTAAACGCTCTTCTGTCGCAGGTAAACGTCCACTACCTGCCGATATCGCTGAAGGCGAATTAGCGATTAACTTAAAAGATTGTATGCTCTTTACAAAAGATGACCAGAACATGATTGTCGATTTAGGCTTTGCTAAAGGTGGCAATGTCGATGGCAATATTAACCAAGTTTCTGGTAACTTTAAAACAGCAGGTAATGTTGAAGGTAAAAACTTTGATATCACTGATTCTGCTAAAATTAATAACAGCACAAAAACTAAATATCTTACTATTTCTACAAATGATGAGCCTACTTCAAACGGAATATATCGTTATTGGGGTTCAGCTACTCGTGGTTCTGTTCATGAATTCGGCTTCGCAGATTCATCTTATGGGATGTATGTCCAGAAGTCTCCTACAGGTGATGTAGATGCCGCTATAAACGGTAAACTCTCTATTGGTACAGCTGGTAATGCTATTTTAAATATTGGCGGGCTGGATGATGGTGACACTGGTTTCACTTCAGGCGGTGATGGTCTCTTACATGTAAGAGCCAATAACGAATATGTTATGCAATTTCAATCTAGTGTTGCTACAGTTCATAAAATACTCAGACCAAATGCTGGCATCGAAACATCGTATAAAGGCTACGGTACTTATGATTTTATTAGCTTAGCTCAATGGGCTGATACACCTGAAACTGCTAATGGTGTGAACCATCTACGTAAAATGCGTGGTTGTGCTGCGGGCACTATATTTCATGAATTGGTTGATCAGAAAAATAGCGAAATTGCGTGGTATCAAGGCAACGGGCCAGAAATAAAAATTGTGTCGTGGAACTCTGACGGCGATCTGAAAGCTAATGGTTCTATTACTGCTTTAAATGGTTCATTTTTTAGCAGGGCTAGTAATGCTGCATACAATGCTAACTATTGGTTCCATGGTGAATCAGGTCAAGAACGCGCAGTAATTTATGCAGGTGCTAATGGACAGTTGAGACTAAGAAACCAGGCCACGGGTTCAGGTGAAATGGTGTTTGATGGTGGTATGATTCAAACATTAACTATGGTAAGCGGTTCTGAACGTGCTCTCATTCGTGGTACTGTTGATGGCGGTTCTCATGTAGCGTGGCGAGATCGTTCTTCAGGTATTCAATTAGATTGTCCTAATTCTGATAATGTTGCTTATAACATTTGGAAAGCTACTAAATGGGGTGCAAACCATTTAGCTGCTATGGATGTCCACGCTCCTGCCGGTGATCCGAATAACGTTGTTATTCGTTTATTATCAGGCAACCATGTACATAATTGGAATGGTCCTAACTATAGTTCACCAGGAACTATAGCAGCTGGTGGCAGACTATCTACCGGAGCAGGCGTTTATGCTGCGGGTCGAGTCGAAGGTCATGACTTGGTATCTCGTGGAGAAATTTACGGGGCTGGCGGTAACGTTACGATTGATACTTCTGGTAACATTTTAGCTTCTGCTTGGGAAACAGGTAATCTGAAACACGAGTTGAATACTATCAGGACTGCTGCTAATAATGCGCAAAGTACGGCGAACACGGCTAACGCAACTGCTAATAATGCGCAAAGTACGGCGAACACGGCTAACGCAAATGCTAATGCTGCTGCTCGTTGGGTGAATTGGGGTACATCATATAACTTTGGGCTGTTGAACCAGACTCCAAACCAACGTATCATTGATAAAGGGTGGTTCTTGGTTGGTCTAGCGGGAGCCGGACAAAATAATAACACTATAAACCTTATCGGTGGTCGTATTCAGGTTTGGAATAATAACAGTGGTTGGGTTGATTCATCAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2a02ab08566db45822036ff218621cca373b504a894c3955b85e305871ce77ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6541
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of vB_YenM_TG1, a broad host range bacteriophage which infects Yersinia enterocolitica Leon-Velarde,C.G., Kropinski,A.M., Chen,S., Griffiths,M.W. and Odumeru,J.A. 2014-10-28 — GenBank