Protein

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Genbank accession
AKJ73461.1 [GenBank]
Protein name
colanic acid biosynthesis protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVRYVFPLRDDAPVFLPRWGTLVSPKDQIIDRSTNSIYQWTGAYPKLVPADSTPESTGGVSEGGWSANDPSLRGDLAGANGSTFIGGPAGTVAQSLDGFVTPAQFMGKYPTTTEAVTALVAYAKENKKAVLAWGWNLVLETSVYIDGVEWYGGSFNQTGGNRYMYLSNSTFRWVTFTGVCTRHYGGRLIITDSSWLNNTNTAAMLLQALPVEGTIDILDSDFRGCKYGILQQGTGAVVSRARFARLNFNDLTGDAIECNVVQRHYKAGGLTIEDINIDNINNTDGSPNWGIGIGIAGQGPYGADASDDQYVSGIIIRNVKMRRVRQCIHFELCRDFKVENVEVYPDASVSNGTLLASGGVVVYGSKDFIIDGVRGEW
Physico‐chemical
properties
protein length:377 AA
molecular weight: 40909,38490 Da
isoelectric point:5,10928
aromaticity:0,10610
hydropathy:-0,14907

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
18–78
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
21–66
IPR040775
DC_0071
STR
25–375
DC_0071
AKJ73461.1
1 377
Architecture
ATT
STR
ATT 18-78 | STR 79-375 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKJ73461.1
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 110 110 0,9912
Central domain 111 366 257 0,9975
C-terminal 367 377 10 0,0379
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-110
Central
111-366
C-terminal
367-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 40
[NCBI] 		1654893 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKJ73461.1 [NCBI]
Genbank nucleotide accession
KR296694 [NCBI]
CDS location
range 10925 -> 12058
strand +
CDS
ATGGTCAGATATGTTTTCCCGCTTCGGGATGATGCGCCTGTTTTCCTTCCAAGATGGGGGACACTCGTCTCCCCTAAAGATCAGATCATTGACCGATCAACCAACAGTATTTACCAATGGACAGGGGCATATCCAAAACTTGTTCCTGCGGACTCCACCCCAGAGAGCACAGGTGGTGTTAGTGAAGGTGGTTGGTCAGCCAACGATCCATCTTTACGTGGAGATCTTGCAGGCGCTAACGGTTCAACATTTATTGGTGGTCCGGCAGGAACAGTAGCTCAATCACTTGATGGTTTTGTTACCCCAGCACAGTTTATGGGTAAATACCCCACCACAACCGAGGCAGTGACCGCACTGGTGGCATATGCTAAAGAGAACAAGAAAGCCGTCCTTGCATGGGGATGGAACCTTGTTCTGGAGACCAGTGTGTATATTGATGGTGTTGAGTGGTATGGTGGTAGCTTCAACCAAACTGGCGGCAACAGATACATGTATCTCTCAAACAGTACGTTTCGTTGGGTAACTTTCACAGGTGTTTGTACTCGTCATTACGGCGGGCGTTTGATTATCACTGACTCCTCTTGGCTCAATAATACCAACACGGCAGCTATGCTTTTACAGGCTCTTCCTGTAGAGGGCACAATTGACATTCTGGATAGCGATTTCAGAGGTTGTAAGTATGGTATCCTACAGCAAGGTACAGGTGCTGTTGTAAGCCGAGCACGTTTTGCTCGTCTTAACTTCAATGATTTGACAGGCGATGCGATTGAGTGTAACGTTGTGCAAAGGCACTACAAAGCAGGTGGGCTGACAATAGAAGATATTAACATTGACAACATCAACAATACAGACGGGTCTCCAAACTGGGGGATTGGCATCGGTATTGCGGGGCAGGGTCCGTATGGTGCTGACGCCTCTGATGACCAATATGTCAGTGGGATCATCATTCGTAATGTTAAAATGCGTCGAGTCCGCCAATGTATCCACTTTGAACTTTGCCGAGACTTCAAGGTTGAGAACGTTGAAGTTTACCCAGATGCGTCTGTTTCTAACGGAACATTACTGGCCTCTGGCGGTGTTGTGGTCTATGGTTCCAAAGACTTCATCATTGACGGTGTTCGTGGCGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd5059544253ed4ecfc4eeac057848ef5aaf56b3ab2a2af8185b2c552a52fe62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50