Protein

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Genbank accession
UJD21338.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MKKILDSAREYLRTHNKIKTACLITLELPGSTGSSSAYIYLTDYFRDVIYNGILYTSGKVKSITTHKQNRDLSIGSLSFTITGTAEDEVLKLVQNGVSFLDRSISIHQAVIDEEGNILPVDPDTNGPLLYFRGKITGGGIKDNIGTSGISTSIITWNCSNQFYDFDRVNGRFTDDADHRGLEIVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFLPVVYGVQKIPGIPVFADTELHNPNIVYVVYAFCEGEIDGFLDFYFGDVPMICIDPNDSKSRTCFGTKKVAGDTMQRIASGQPSSEPSVHGQEYKYNDGNGDIRIWTYHGKADQSAADVLVNIAKEKGFYLQNLNENGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEVSAEVQGKKIKIYHSDGRVTADKTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDAVGENRQIVQMNTILDTSESVFKNVQGLIESYGGAINNLSGQYRITVEKFSNTPLEIDFLDTYGDLELSDTTGRNKFNSVQASILDPALSWKTNSITFFNSVFKEQDKGLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYHFIGIEPNDPIAFTYDRYGWEKKYFLVDEVENSREGKINITLQEYGEDVFINSEQVDNSGNDIPDVSNNVLPPRDFIYTPTPGGTVGAIGKNGELSWLPSLTNNVVYYSIVHSGHADPYIVQQLETNPNARMIQEIIGESAGLAIFEIRAVDINGRRSSPVTLSVELNSAKNLSVVSNFRVINTATGDASEFVGPDVKLAWDRIPEEDIIEGIYYTLEIYDNLDRLLRSVRIEDQYVYDYLLIYNKADYALHNEDALGINRKLRFRIRAEGDNGEQSVDWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107179,54370 Da
isoelectric point:4,99026
aromaticity:0,11275
hydropathy:-0,39410

Domains

Domains [InterPro]
DC_0187
STR
229–948
DC_0187
IPR032876
ATT
594–697
IPR032876
UJD21338.1
1 949
Architecture
STR
ATT
STR
STR 229-593 | ATT 594-697 | STR 698-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD21338.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9469
Central domain 313 526 215 0,2949
C-terminal 527 949 422 0,0068
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-526
C-terminal
527-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_STy-RN29
[NCBI] 		2910950 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD21338.1 [NCBI]
Genbank nucleotide accession
OL800604.1 [NCBI]
CDS location
range 15554 -> 18403
strand +
CDS
ATGAAGAAAATTCTTGATAGTGCAAGAGAGTATTTAAGAACTCATAATAAAATAAAAACTGCATGTCTTATTACTCTAGAATTACCTGGCTCTACTGGATCAAGTTCTGCCTATATATATCTTACAGATTATTTTAGAGATGTAATTTATAACGGTATTCTTTACACGTCTGGTAAAGTTAAGTCTATAACAACGCATAAACAAAATAGAGATCTTTCCATTGGTAGCCTTTCTTTTACTATCACAGGTACTGCTGAGGATGAAGTATTAAAACTCGTTCAAAATGGTGTATCCTTCCTAGATAGATCTATCTCAATCCATCAAGCGGTTATTGATGAAGAAGGTAATATTCTTCCTGTAGATCCAGACACAAATGGTCCTTTACTTTACTTCCGTGGTAAAATCACTGGTGGTGGTATTAAGGATAACATTGGTACTTCTGGGATTAGCACATCGATTATTACATGGAACTGTTCGAATCAATTCTACGACTTTGATAGAGTAAACGGACGTTTCACGGATGACGCTGATCATAGAGGGCTTGAGATTGTTGCTGGCCAATTAGTTCCATCTAATGGTGCTAAACGACCTGAATACCAAGAGGACTACGGATTCTTCCATGCTAACAAGAGTATTTCTATTCTTGCTAAGTATCAGGTACAGGAAGAACGTTATAAGTTACAATCTAAGAAAAAGTTATTTGGTCTTTCTAGAAGCTATAGTCTAAAGAAATATTATGAGACTGTAACTAAGGAAGTAGATCTTGATTTTAATTTAGCTGCTAAATTCCTTCCAGTAGTGTATGGTGTTCAGAAAATTCCTGGAATCCCAGTATTTGCAGATACTGAACTGCATAACCCTAATATAGTATATGTAGTATATGCTTTCTGTGAGGGTGAGATTGATGGATTCCTAGATTTTTACTTTGGTGATGTACCAATGATCTGTATTGATCCTAATGATAGTAAATCTCGTACTTGCTTTGGTACTAAGAAAGTAGCTGGTGATACCATGCAACGTATTGCTTCTGGTCAACCAAGCTCTGAACCTTCTGTTCATGGACAGGAATATAAGTATAATGATGGTAATGGTGATATCCGTATCTGGACGTATCATGGTAAAGCAGATCAATCTGCTGCGGATGTTCTAGTTAACATTGCAAAAGAGAAAGGTTTCTATTTACAGAACCTGAATGAGAATGGGCCAGAATACTGGGATTCTCGTTATAAACTGTTAGATACCGCTTATGCTATAGTTCGCTTTACTATTAATGAAAATAGAACAGAAATTCCAGAAGTTAGTGCCGAAGTTCAAGGGAAGAAGATTAAGATCTATCATTCAGACGGTAGAGTAACTGCTGATAAGACTAGCTTAAATGGTATCTGGCAAACTCTGGACTACCTAACCTCTGATCGCTATGGTGCTAATATCACTATTGATCAGTTTCCTCTCCAGCAACTTATTCAAGAAGCAGCTATTCTGGATATCATTGATGAATCCTATCAGGTTTCTTGGCAACCCTATTGGAGATACGTTGGATGGACTGACGCTGTAGGAGAGAATAGACAAATAGTTCAAATGAATACTATTCTAGATACCTCTGAGTCAGTATTTAAAAATGTACAGGGATTAATAGAGTCTTATGGTGGTGCTATCAACAACTTATCTGGGCAGTATAGAATAACTGTTGAAAAGTTCTCAAATACTCCACTGGAGATTGACTTCTTAGATACCTATGGTGATCTAGAATTGTCGGATACTACTGGTAGAAATAAATTCAACTCAGTTCAGGCATCCATTTTAGATCCTGCACTAAGCTGGAAAACTAACTCAATAACATTCTTTAACTCCGTGTTCAAGGAACAGGATAAAGGCTTAGATAAGAAGTTACAACTATCATTTGCAAATATTACCAACTACTACACTGCACGTAGTTTTGCTGATAGAGAACTGAAGAAGTCTCGTTACTCTAGAACTTTGTCATTCTCTCTACCGTACCATTTCATTGGTATTGAACCAAACGATCCAATTGCTTTTACATATGATCGTTATGGTTGGGAAAAGAAATATTTCCTAGTAGATGAGGTTGAAAACTCTAGAGAAGGCAAGATTAATATTACTCTACAAGAGTACGGAGAAGACGTATTCATTAACTCCGAGCAGGTAGATAATAGTGGTAATGATATTCCTGATGTAAGTAATAATGTTCTTCCTCCAAGAGACTTTATTTATACACCAACTCCTGGCGGTACTGTTGGAGCTATTGGTAAGAACGGTGAATTGTCTTGGCTTCCTAGTCTAACAAATAACGTTGTTTACTATTCTATTGTTCACTCTGGCCATGCTGACCCATATATCGTGCAGCAACTAGAAACTAATCCAAATGCTAGAATGATCCAAGAAATTATTGGAGAATCAGCTGGATTAGCAATTTTCGAAATTAGAGCAGTAGATATTAATGGTAGACGAAGTTCACCAGTAACATTATCAGTAGAACTGAATTCTGCTAAAAACTTAAGTGTTGTTAGTAACTTTAGGGTTATTAATACTGCTACAGGAGATGCATCGGAATTTGTTGGACCAGATGTTAAACTGGCCTGGGATAGGATTCCAGAAGAAGACATTATTGAAGGAATCTACTACACTCTTGAAATCTACGATAATCTAGATCGTTTATTAAGAAGTGTCAGAATAGAAGATCAATATGTTTATGATTATCTACTGATATATAATAAGGCAGACTATGCTCTTCATAATGAAGATGCTCTAGGCATTAATAGGAAGTTACGCTTCCGAATTAGAGCAGAAGGTGACAATGGCGAGCAATCTGTGGATTGGGCATCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
91e5f0a9e27dd7aecf55f4c54916be51d818ae9969e41aabbaabbd86a464ae89
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of Salmonella phage vB_STy-RN29 Imklin,N. and Nasanit,R. 2022-01-10 — GenBank