Protein

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Genbank accession
XDG30362.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTDLIKLLPQDSHASLVAYNQFDIHTPKQVVADGKTLYELLEDLGFVKWDDAACKYERLTPFVVQLNGDWLLESEGQFDYMVQPGDAIRVERLAGKGKKGGSKGLGIITAIAAIVAAPFTGGASLWLLVASAALLMPGMAGVPKPQAANLSGKDGASPTYSLTSSGNQARLLSAVPRLYGRMRFTPDLASQPYTEFEGNEQYLYQLFALSCGEVELHNIYMDQTPLGNFTDVKTELVQPYQAVTLFPDNVVTSEAVQGIKLENGLLSGPYIVGQPGTITTRVGLDFVWPGGCYHIDDQGNVRSSSVTLTTYIQQVNDQGQLVGQRRELGTGTQSFATQTPQRITHIIDVPPGRYALWATRAGLSNQDNSRIQNDVQWAGLRAYLKRDDGFNYGNVTLLALKMKATEVLNSSTMRAFTVEATGKVQTWSPAGGWTPKPVADNTITWAAADILHNADYGKGLATSRIDMAGLYRLHDIWKSRGDTFNGIFDTTISVWEALQKVLRAGRAAPIYYAGKVEFIREEPQSLPVQMFQPRNIVQGSLSFDYNWPTSSTPNYVIIQYLDSTTWTRKEVECKLPNVAATKAATVELFGVTNRDQAYREGMFLAASNRYRRRNIRFSVEMEGQIVRYNDLIQISHDVADWGYSGVVKSFNAQTGVLRTTEPILFPNNNCVIAFRKRDGSAHGPFPITPDPSLVNEPNSFGCIVGGTVAQRQAIYISDGVRSERTLYQAGPVGKAGLKALVNKVQARGDDTYNITALEYIPHIYTMENGLPVPPPESGSNLPRPPVGPIVDQITVTETTNAGEQAIQWTPAVGATSYQLQYSIAAMEWNTLVDSTQRTAILANIPPGEVQVRVRAIGATAGPWATWSGELSGSALGLPEIAKLETVPGMWSVGITWELTPNSKIIAAYTTIVVSTDPLPGPANSKVLGEYAYPITSAVLDNVQPGQRIYVFAAVTDKAGRQGPWYNNMGAVEGKPTEDPNLLLPYLTEQIGRSQLTKAMRDEIDSIIEGGEGLQSQITNLATQTTDGFTAVAAQFSTVQAQIDNQNTAIAQITQEVEATLDGAMKSLITLRTQLRSDGKLITAGIGIGVVPDFNDPTQHNSEIILQAGRIAFTTSQINDPLVTPLVVEGSNVYMHGAFIRQATIASAQIADASISSAKIQDLSVSTIKIAGNAVTIPNYNRWDEEWQGSPDMRTCLSLNLVLPNYGGVVVTWTSVMHTNGTVPYRFRILVDGAVEMDTGTHEWAQSSLTLSIGRFFNAGTYNIEVQCQAPGAPGRFVKLTYQNLLAQAAMR
Physico‐chemical
properties
protein length:1291 AA
molecular weight: 140490,21140 Da
isoelectric point:5,42241
aromaticity:0,08443
hydropathy:-0,16003

Domains

Domains [InterPro]
DC_0129
STR
3–1089
DC_0129 DC_1315
NF040662
Unmapped
276–764
NF040662 IPR013783 IPR015406
IPR055385
ATT
277–382
IPR055385 IPR032876
IPR053171
Unmapped
336–1005
IPR053171
XDG30362.1
1 1291
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 3-276 | ATT 277-382 | STR 383-492 | ATT 493-637 | STR 638-1089 | RBD 1090-1291
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDG30362.1
1 1291
Domain Start End Length (AA) Confidence
N-terminal 1 103 103 0,9890
Central domain 104 302 200 0,0371
C-terminal 303 1291 988 0,1813
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-103
Central
104-302
C-terminal
303-1291

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_HTN2
[NCBI] 		3236647 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
28adfbf82ebd2cad43dda187ffb7825a9359be8073372a8a360dd5d861742a81
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7590
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50