Protein

View in Explore
Genbank accession
QPI15384.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MISQFNQPRGSTSIEVNKQSIARNFGVKEDEVIYFTAGIDLSGFKVIYDESTQRAYSLPSGIVSGTTAISLDERAILTHSAGSVDLGELAVSREEYVTLTGSFTFGQTVNTKNELLVHADAKYRWDGALPKVVPAGSTPASTGGVGLGAWVSVGDAAFRQEANKKFKYSVKLSDFTTLQDAVTAAVDGLLIDTDYHFTDGDIVDFGGKAITIDCKAKFIGDGVLNWNNLGIGSKVISPHMHTKTTPYTVYRFDDSGNWVTNPTTVLASVAQRLDKGYKPNVNDQDIWASLPDSVKNQVAGATLRINSADNIKIIHPEATMGGYLFTLCNRILVESPRNFIAWESGITFENHHTSAWGTGNWVVGGEIKYGSGSAVLFIRNDGGDDHDGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDVNADTGPATERVDDYSLAEYPWFHLPTKHIIRNIITRDCMGIGAWWDGQLNIIDNVITYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYTTQGYAVYAPTSEISNVACAGSGTKLILCTYVGDIQGGNINVQHGDNTMTLAMRPAMGGTTNPSLLMTADCQVALPGGEASIVHLSAIQEGVRVAEMQLNRLGFKHMSIPAASSQLPESALEHNSSVGFFFGSDGALRLLAKKPDGSYVTYSL
Physico‐chemical
properties
protein length:698 AA
molecular weight: 75466,64840 Da
isoelectric point:5,35784
aromaticity:0,08739
hydropathy:-0,17264

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR012332
G3DSA:3.30.2020.50
ATT
1–100
G3DSA:3.30.2020.50 G3DSA:2.10.10.80 IPR015331
IPR040775
RBD
90–155
IPR040775 IPR011050
QPI15384.1
1 698
Architecture
ATT
STR
ATT 1-159 | STR 160-698
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI15384.1
1 698
Domain Start End Length (AA) Confidence
N-terminal 1 176 176 0,9870
Central domain 177 582 407 0,9893
C-terminal 583 698 115 0,8823
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-176
Central
177-582
C-terminal
583-698

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GEC_vB_N6
[NCBI] 		2777379 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI15384.1 [NCBI]
Genbank nucleotide accession
MW006480.1 [NCBI]
CDS location
range 125099 -> 127195
strand -
CDS
ATGATTTCTCAATTCAATCAACCACGCGGCTCCACTTCCATAGAAGTTAACAAACAATCTATCGCTCGAAATTTCGGTGTCAAAGAAGACGAAGTCATTTATTTCACTGCTGGTATTGATCTCAGTGGATTTAAAGTAATTTATGATGAGTCTACCCAACGGGCTTATTCTCTCCCTTCCGGTATTGTTTCAGGGACAACTGCAATTAGTCTGGATGAAAGAGCTATCCTCACTCATTCCGCTGGTTCTGTTGACCTTGGGGAATTAGCAGTAAGCCGCGAAGAATATGTGACGCTTACGGGTTCTTTCACTTTTGGTCAGACCGTCAACACTAAAAATGAACTTCTTGTTCATGCTGATGCGAAATACCGTTGGGATGGTGCATTACCTAAAGTTGTTCCTGCTGGTTCAACTCCAGCATCAACTGGTGGCGTTGGCTTAGGTGCTTGGGTTAGTGTTGGTGATGCTGCATTTAGGCAGGAAGCTAATAAGAAATTCAAATATTCGGTTAAATTATCAGACTTTACAACGCTGCAAGATGCAGTTACTGCTGCCGTTGATGGCCTTCTTATTGATACTGATTATCACTTCACAGATGGTGATATCGTTGATTTTGGTGGTAAAGCTATAACTATTGATTGTAAGGCGAAGTTCATAGGAGACGGTGTTCTTAATTGGAATAACCTAGGGATTGGATCTAAAGTTATTTCTCCGCATATGCATACCAAGACCACTCCTTATACTGTATACCGTTTCGATGATAGTGGAAACTGGGTAACAAACCCAACCACAGTATTAGCATCTGTTGCCCAGAGACTTGATAAAGGTTACAAACCTAATGTTAATGACCAGGACATTTGGGCATCTCTACCTGATTCCGTTAAAAATCAGGTTGCTGGGGCGACACTACGAATTAACTCCGCTGATAATATTAAGATAATTCACCCGGAAGCTACTATGGGGGGCTATCTATTCACCCTATGTAACCGCATCCTAGTTGAATCCCCGCGTAACTTTATCGCATGGGAATCTGGAATTACCTTTGAAAACCATCACACATCAGCATGGGGCACTGGCAACTGGGTGGTCGGTGGTGAGATAAAATACGGTTCTGGCTCCGCAGTTTTATTTATCAGAAATGACGGTGGTGATGATCATGATGGAGGGGTAAGAGATTTAATATCCTATCGCGTTGGAGAATCTGGTGTTAAAACCTATCAAAATGAAATAGGTGGACGTTCAGCCAGGAACTACCGATTAGTGTTTGATAACATAACTACAATCCAGTGTTACTACGATGGTATTGATGTTAATGCTGACACCGGTCCAGCTACTGAACGTGTAGATGACTACTCATTAGCTGAATACCCGTGGTTCCACCTACCTACAAAACATATCATCCGTAATATCATTACTCGTGATTGCATGGGAATTGGTGCATGGTGGGATGGTCAACTGAACATTATTGATAATGTTATTACCTATGAGGCTCATAAAGAGGGTATTTTTGATAGAGGTACTAACAATGATATTACTAATGTAACAGTTATAGGTGCAAACAAAGATTTAACTAACCTAAATCAGCTTACATGTGAAGGTGGCAGCAGATTGCGAGGCGTTATGATTCATGCATACACCACACAAGGATATGCTGTTTATGCGCCAACATCTGAAATTAGTAATGTAGCGTGTGCAGGGTCTGGCACTAAACTTATACTTTGTACGTATGTTGGTGATATTCAGGGTGGGAACATAAACGTACAGCACGGTGATAACACCATGACCCTGGCTATGCGTCCAGCAATGGGGGGAACAACAAACCCATCATTGCTTATGACAGCAGATTGCCAAGTGGCGTTGCCAGGAGGTGAGGCAAGTATTGTTCACCTGTCAGCTATACAGGAGGGTGTACGCGTAGCTGAGATGCAGCTTAACCGACTTGGCTTTAAGCATATGAGCATACCTGCTGCCTCTTCACAATTACCAGAGAGCGCTTTGGAACATAACTCGTCTGTAGGATTCTTTTTTGGCTCTGATGGAGCATTGCGACTTCTTGCTAAGAAACCCGATGGGTCATACGTAACATACTCACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
09dac3b0a5631f0c193b8156b6b18d606c42f2a4a8461650fb43511f70c81483
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50