Protein

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Genbank accession
AII27316.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MSRYDHSTVEYTDKIKDLTDSVNRVGNYLSGDNSPYDDVQKLKAITQNIKLTKDTGLAKNIPTGTTTLRSVVETGVYYINSTEALALTDKPPELTGAFILVNYPTIASTSVKQEVHMFATGITGSYVGYRWFSASSVSSWWTYENTLGSQAKADKALADGKTYTDSSVNSALQAIQNSAQMYKLTEDDGKPIDASAMATPPTSVASLTKTGIYYFTAAFGNTMPDTPCTGQPFWLVVLQHVTDNSISQSVTANTTAVERVVADRIITTLGVPSKWEYRAKASNFFFSASNSSRITLVSTQQNIITPNKFINNPGSLPLSAINPAITIPEDGMYHVMVSLNINGILEKVYLVSELTLLINDVLHPATFGMTKTVDNANGQYSLAGNGIYQLKKGDKLKLRSYCNNTGNNPYLDVDKLYISVGKIADISLFK
Physico‐chemical
properties
protein length:430 AA
molecular weight: 46853,30610 Da
isoelectric point:6,53190
aromaticity:0,09070
hydropathy:-0,19023

Domains

Domains [InterPro]
DC_1285
ATT
1–158
DC_1285 IPR008983
DC_1773
STR
152–401
DC_1773
AII27316.1
1 430
Architecture
ATT
STR
RBD
ATT 1-158 | STR 159-401 | RBD 402-415 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LMTA-34
[NCBI] 		1486397 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AII27316.1 [NCBI]
Genbank nucleotide accession
KJ668715 [NCBI]
CDS location
range 44235 -> 45527
strand -
CDS
TTGTCTAGATACGACCATAGTACTGTAGAGTACACAGACAAAATTAAGGACTTAACAGATTCAGTAAACCGAGTAGGGAACTACTTATCAGGAGACAATAGCCCTTATGACGATGTTCAAAAATTAAAAGCAATCACACAAAATATTAAGCTAACTAAAGATACAGGTTTAGCTAAGAATATCCCAACAGGAACAACTACACTGAGGTCAGTAGTCGAAACAGGAGTTTACTACATTAATAGTACAGAAGCTCTAGCCCTAACTGATAAACCCCCAGAGCTAACAGGAGCCTTTATACTAGTAAACTACCCGACGATAGCTTCTACTTCTGTTAAACAAGAAGTACACATGTTTGCTACAGGGATAACAGGTAGCTACGTAGGGTACCGTTGGTTTTCTGCTTCTAGTGTTAGTTCATGGTGGACTTATGAAAATACACTAGGTTCACAAGCTAAAGCCGATAAGGCACTAGCCGATGGGAAAACATATACCGATAGCTCGGTAAACTCCGCTTTACAAGCAATTCAAAACTCAGCACAAATGTACAAGTTAACCGAAGACGATGGTAAGCCGATTGATGCTTCTGCTATGGCTACTCCACCAACTAGTGTAGCTTCTCTAACGAAGACAGGAATATATTACTTTACTGCCGCTTTTGGAAATACAATGCCAGATACCCCTTGTACAGGGCAACCATTCTGGTTGGTTGTTTTACAGCATGTAACAGATAACAGTATATCACAATCTGTGACAGCCAATACTACAGCAGTAGAGAGGGTAGTCGCAGATAGGATTATTACTACTCTAGGGGTACCGAGTAAGTGGGAATACAGAGCTAAAGCCTCTAATTTCTTCTTTAGTGCTTCCAACTCATCACGTATAACACTAGTATCGACCCAACAGAATATTATAACACCTAATAAATTTATTAATAACCCCGGTAGTTTACCACTATCTGCGATAAACCCTGCAATAACTATTCCAGAAGATGGGATGTACCATGTGATGGTATCCCTAAACATTAACGGTATTTTAGAAAAAGTATACCTAGTAAGTGAGTTAACTCTACTAATAAATGACGTATTACACCCAGCTACATTTGGGATGACAAAAACAGTAGACAATGCTAACGGGCAGTACTCTTTAGCAGGGAATGGTATATATCAACTAAAAAAAGGAGACAAGTTAAAACTAAGAAGTTACTGTAACAATACAGGGAATAATCCTTACTTGGATGTAGACAAACTTTATATATCTGTCGGTAAGATTGCAGACATTTCATTATTTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3447b21a3249379472dd04b64b66f49c99e9271be26983a4c3bf04aedacfc6d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8094
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing of lytic Listeria phages Woolston,J., Rajanna,C., Abuladze,T., Li,M., Anderson,B. and Sulakvelidze,A. 2014-08-06 — GenBank