Protein

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Genbank accession
WMM95125.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MGSVVSQSIPNFLNGMSQQTPTQRGINQGEDQVNLQNGLVDGLSKRPPLDFVATLDGSNIYSNKTKFWSIQRDADNQFIVALYNGGIKVFDLLGNEKTVTVASGSSYLTSTNPRENFKLVNIADYTFIANTATTVAADSTTSAAKVEEFLIVCKLTNYGREYKVALKHPSMAQELEVIFQLPSGNDASTDAKFRDTNKITDILLYGTSITHWDSAADGIGFKGVRTDTNASVSTTQGLANYSGFTSYFTFEAFDSVIYGKPTDQNANYTITTSDGSGNTAMYAIRDEIQDFSKLPFYGKEGVIIKITGEEGDTLSDYYVNFSGKSGVWNETIAPATSVGLDNSTMPHALINNNNGTFTFQQLDWTDRVCGDIDTNPNPTFVGKKINNLTFYKNRLGILSGENLVLTENASFFNYFATTSTQVLDTDPIDIAASGTQVNTLKNSVGFNESLLIFSDTAQYKLDSAAETITPTTAILNAVSTFEHDAKVTPVSAGKFAYFAQARTNNTAIREYFADDDTLTNDGLDITVSVQNLIPSNCYQIVSNTTEDTLIFLTSDTADSQTAPYSGTVSTTYANTMYIYKYFFDGGEKVQNAWSKWTFTGVKIIGAMSLESFIYVLASEGTTTKLLKIDLRNLKDTTIGHGVYLDLKTSVTGTYDAATNLTTFTSPYGVKTGLIAVDRTNGNNYTATNTTGSTYTIVGNHTALYIGVPYESKYTMSTQFVRENTGRGLVAVTSGRYQIRNISFNFENSGFFQVEVTPENRDTFTTIMNGYVIGTSTSVIGQPAISTGTLRVPVQAENTQFTLDIKSSSHLPMYIAGAEVEGYYHNRARRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 90654,53280 Da
isoelectric point:4,86487
aromaticity:0,10843
hydropathy:-0,24217

Domains

Domains [InterPro]
IPR058003
TTP
3–830
IPR058003
WMM95125.1
1 830
Architecture
TTP
TTP 3-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WMM95125.1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9714
Central domain 135 333 200 0,6553
C-terminal 334 830 496 0,3354
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-333
C-terminal
334-830

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC131P
[NCBI] 		3072835 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95125.1 [NCBI]
Genbank nucleotide accession
OR420738 [NCBI]
CDS location
range 21880 -> 24372
strand +
CDS
ATGGGAAGTGTTGTTTCACAATCTATTCCTAACTTCTTAAATGGTATGTCTCAACAGACACCAACTCAAAGAGGTATTAATCAGGGAGAAGACCAAGTAAATTTACAAAATGGTTTAGTAGATGGTTTATCTAAAAGACCTCCTTTAGATTTTGTAGCAACATTAGACGGCAGTAATATTTATTCTAACAAAACAAAATTTTGGTCAATACAAAGAGATGCAGATAATCAGTTTATTGTAGCTTTATATAATGGTGGTATCAAAGTATTTGATTTATTAGGTAATGAAAAAACTGTTACAGTTGCAAGTGGTTCAAGTTATTTAACTTCAACAAACCCTAGAGAAAACTTTAAGTTAGTTAACATTGCTGATTATACATTTATTGCTAACACAGCAACAACAGTTGCGGCTGACAGCACAACGTCTGCGGCTAAAGTAGAAGAGTTTTTAATTGTTTGTAAATTAACAAACTATGGTAGAGAATATAAAGTTGCATTGAAACACCCATCAATGGCACAAGAACTAGAAGTTATTTTTCAGTTACCTTCAGGTAATGATGCTTCTACTGATGCAAAATTTAGAGATACAAATAAAATTACAGATATACTTTTATATGGAACTTCAATTACACATTGGGACAGTGCGGCTGATGGTATTGGATTTAAGGGAGTAAGAACTGACACGAATGCTTCTGTATCAACTACACAAGGATTAGCTAACTATTCTGGTTTTACATCTTATTTTACGTTTGAGGCTTTTGATAGTGTAATTTATGGTAAACCGACAGACCAAAATGCAAACTATACTATAACTACATCTGATGGTTCTGGTAATACAGCCATGTATGCCATTAGAGATGAGATACAAGATTTTAGTAAGTTACCTTTTTATGGAAAAGAAGGTGTAATTATAAAAATTACTGGAGAAGAAGGTGATACATTATCTGATTACTATGTAAATTTTTCAGGTAAATCTGGTGTATGGAATGAAACTATAGCACCTGCAACTTCCGTAGGTTTAGATAATTCTACAATGCCACACGCATTGATTAATAACAACAATGGTACATTTACATTTCAACAATTAGATTGGACAGATAGAGTATGTGGAGATATTGACACTAATCCTAATCCAACTTTTGTTGGTAAAAAAATTAACAATTTAACATTTTACAAAAACAGATTAGGTATATTATCAGGAGAGAATTTAGTATTAACAGAAAATGCTTCTTTCTTTAATTACTTTGCAACAACATCTACACAAGTATTAGATACTGACCCTATTGATATAGCGGCTTCAGGTACACAAGTTAACACACTTAAAAACTCTGTTGGCTTTAATGAAAGTTTGTTAATATTTTCTGATACAGCACAATATAAATTAGATAGTGCGGCAGAAACTATTACACCTACTACAGCTATCCTTAATGCTGTTTCTACTTTCGAACATGATGCAAAAGTTACACCTGTTTCGGCAGGTAAGTTTGCATATTTTGCTCAAGCAAGAACTAATAATACAGCCATAAGAGAATATTTTGCTGATGATGATACTCTTACTAATGATGGATTAGATATTACAGTTTCAGTACAAAACTTGATACCTAGTAACTGTTATCAAATTGTAAGTAATACAACAGAAGATACTTTAATATTTTTAACATCTGATACCGCAGATAGTCAAACAGCACCTTATAGTGGCACAGTGTCTACAACATACGCTAACACAATGTACATCTATAAGTATTTCTTTGACGGTGGTGAGAAAGTGCAGAACGCATGGTCTAAATGGACATTTACTGGTGTTAAAATTATAGGTGCTATGTCATTAGAAAGTTTTATTTATGTATTAGCGTCAGAAGGAACTACTACAAAACTATTAAAAATAGATTTAAGAAATTTAAAAGATACAACAATAGGTCATGGAGTTTATCTTGACCTTAAAACTTCAGTTACAGGAACGTACGATGCGGCAACTAATTTAACTACGTTTACTTCACCTTATGGAGTAAAAACTGGATTGATTGCAGTAGATAGAACTAATGGAAATAACTACACAGCAACAAATACAACAGGTTCAACATATACAATCGTCGGAAACCACACAGCATTATACATTGGTGTTCCATACGAAAGTAAATACACAATGTCTACACAGTTTGTCAGAGAGAATACTGGAAGAGGATTAGTAGCTGTAACTTCAGGTAGATACCAAATACGAAACATATCATTTAACTTTGAAAACAGTGGGTTCTTCCAAGTAGAAGTCACACCAGAAAATAGAGATACATTTACAACTATTATGAATGGTTATGTTATTGGTACTTCTACTTCAGTAATAGGACAACCTGCTATTTCTACAGGTACACTAAGAGTACCAGTACAAGCAGAAAACACACAATTTACTTTAGATATTAAATCGTCATCTCACTTGCCTATGTATATCGCAGGTGCAGAGGTTGAAGGTTATTATCACAATAGAGCAAGAAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
00d04ea69b15a924e76d33e816d39de4ab6302827bc550f735406ee4c6b88965
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2928
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50