Protein

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Genbank accession
QIG73145.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MKADGSLKSLLQGISQQPVRDRLPGQGTAQINMSADPVKGLSRRPGEDLVNQLGPAGAAKGWGTFQTQDGKQWIVKITAAGPQVFDFNGNQATVTVPGGDTYWSTDGQWSVATMKGKTYLANSGVVVEQDTAMSSYPNYTTYTMAVFQILGGNYGKTYTIRINNAVAASYTTPDGSVSSHALNIDTVYIASQLAASLVTNGYNTGGWTTSRVEDIITVRHNVGVITSAIVSDGAGNINAKAMLDSVGDVADLPRFCYHNFAVRVAQEVDPEEDLWLKFVMDNPAGGLGTSGAWYECLAPGLSVGLKNTSMPRCLTYNATTGAFTAAVVDWADRNVGTNTTNPMPSFVGYPITDISMFQSRLIILAGPNLIASRSKRYEDFFVGSASTLVDSDPLDLTSQAAFASTLKYAIPHNKDLVIFSTKGQFILFGRSAITPSNAALVLTTSFEADLMARPQACGRNVFFATKYGRFAGVREFYTEGGTDINDTRSITQHVNKYMLGSTVHMSATSNYDHLLVHTDNDRKNVYVYQFIWNDQEKIQSAWSKWQFSHEIVYSFFDDELIYMVMQIGTTYYLLRLSLDTVPEGSLDYHVHLDARFDVTGVNTAFVLPFDWLADVPLTIVQGDDCPHPGLPVRISSIVYDPDESGYVVTMREDMMGGDIIVGVNMLSEYQPTMPRAKDSDGVVISNARLVINQFLVSLAGTGEINGQKMTAWGDGPEVSFQGYITNSPGSVTGSPALDDHVFKMPFKAKCDEAEVRFYTDSHWPMTILDIEWEGTINKRGKRIPVGN
Physico‐chemical
properties
protein length:787 AA
molecular weight: 85950,74490 Da
isoelectric point:5,07035
aromaticity:0,10165
hydropathy:-0,14371

Domains

Domains [InterPro]
IPR058003
TTP
5–783
IPR058003
QIG73145.1
1 787
Architecture
TTP
TTP 5-783 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG73145.1
1 787
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,9852
Central domain 133 331 200 0,2381
C-terminal 332 787 455 0,2766
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-331
C-terminal
332-787

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N37
[NCBI] 		2509749 Uroviricota > Caudoviricetes > Autographivirales > Cuernavacavirus > Cuernavacavirus RHphN37
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG73145.1 [NCBI]
Genbank nucleotide accession
MN988528 [NCBI]
CDS location
range 25938 -> 28301
strand +
CDS
ATGAAGGCAGACGGTAGCCTTAAATCACTACTGCAGGGCATTAGCCAGCAGCCTGTTCGAGATAGGTTGCCGGGCCAAGGGACTGCTCAGATTAACATGAGTGCAGACCCTGTTAAGGGCCTGTCTCGTCGCCCCGGTGAGGACCTTGTAAATCAACTAGGTCCCGCTGGTGCAGCTAAGGGCTGGGGAACCTTCCAGACACAAGACGGTAAGCAGTGGATTGTAAAGATCACTGCAGCTGGCCCGCAAGTATTCGACTTCAACGGTAATCAAGCAACGGTTACTGTACCCGGTGGAGATACGTACTGGTCCACAGATGGCCAGTGGTCGGTAGCCACTATGAAGGGTAAGACGTATCTGGCTAACTCTGGTGTAGTAGTAGAGCAGGACACAGCGATGAGTTCGTATCCTAATTACACTACCTACACCATGGCAGTATTCCAGATACTTGGTGGTAACTATGGTAAGACATACACCATCCGCATTAACAATGCAGTAGCTGCTTCTTATACTACCCCTGATGGCTCGGTAAGCTCGCACGCTCTTAATATCGATACGGTGTACATTGCATCGCAGCTTGCAGCAAGTCTAGTAACCAATGGATATAACACTGGTGGATGGACAACGAGCAGAGTAGAAGATATCATTACTGTACGACACAATGTAGGTGTTATTACCTCTGCTATTGTATCGGATGGCGCAGGTAATATTAATGCTAAGGCTATGCTGGACAGCGTAGGTGACGTAGCTGACTTGCCTCGCTTCTGCTACCATAACTTTGCTGTACGTGTAGCACAGGAAGTAGACCCGGAAGAGGACCTGTGGCTTAAGTTCGTTATGGATAATCCAGCAGGCGGTCTAGGTACGTCCGGAGCATGGTATGAGTGTCTAGCTCCCGGATTGTCTGTAGGGCTTAAGAATACGAGTATGCCTAGATGCTTGACGTACAATGCAACTACTGGCGCTTTCACAGCAGCTGTAGTTGATTGGGCTGATCGTAATGTTGGTACTAATACTACTAACCCTATGCCTAGCTTCGTTGGATATCCTATCACAGATATCAGCATGTTCCAGTCGAGACTTATCATCTTGGCAGGGCCTAACCTGATTGCATCTAGGAGTAAGAGATATGAAGACTTCTTTGTCGGATCAGCATCTACTCTGGTGGACAGCGATCCCCTCGACCTTACCTCACAGGCAGCTTTCGCGTCTACACTCAAGTACGCAATCCCGCACAACAAGGACTTGGTTATCTTCAGTACGAAGGGGCAGTTTATCTTGTTCGGGCGGTCGGCTATTACGCCTTCTAATGCTGCCCTAGTATTGACGACTAGCTTCGAAGCAGACCTTATGGCTAGGCCACAGGCTTGTGGTCGTAACGTATTCTTTGCTACTAAGTACGGCCGCTTTGCAGGTGTACGTGAGTTCTATACCGAGGGTGGTACAGATATTAATGATACTAGATCGATTACTCAGCACGTCAACAAGTACATGCTAGGTAGTACGGTACATATGTCAGCGACGTCTAACTATGACCATCTGCTTGTGCATACGGATAACGATCGTAAGAACGTGTATGTATACCAGTTCATCTGGAACGATCAAGAGAAGATTCAGTCAGCATGGTCTAAGTGGCAGTTCAGCCATGAGATCGTGTATTCGTTCTTCGATGACGAATTGATTTACATGGTAATGCAGATCGGCACTACGTACTACTTGCTGCGCCTGTCTCTTGATACTGTGCCGGAAGGTTCATTGGATTACCATGTGCACCTTGACGCCCGCTTTGACGTGACCGGAGTTAACACAGCATTCGTACTGCCGTTCGACTGGCTTGCAGACGTACCCTTGACTATCGTGCAGGGTGATGATTGCCCGCATCCCGGCCTACCAGTGCGCATTAGCAGCATTGTGTACGATCCGGACGAATCTGGTTACGTTGTCACTATGCGAGAGGATATGATGGGCGGGGATATTATCGTCGGCGTTAACATGCTTAGCGAGTATCAGCCTACCATGCCTCGTGCTAAGGACAGTGACGGCGTTGTTATTAGCAATGCACGACTGGTTATTAATCAGTTCCTTGTGTCGCTTGCCGGAACCGGTGAGATCAATGGACAGAAGATGACTGCGTGGGGTGATGGTCCAGAGGTATCCTTCCAAGGGTATATCACCAATAGTCCCGGCTCGGTAACGGGTAGTCCAGCACTAGACGATCATGTATTCAAGATGCCTTTCAAAGCCAAGTGCGATGAGGCAGAAGTACGTTTCTATACAGATAGCCACTGGCCTATGACCATTCTGGATATCGAGTGGGAAGGAACTATCAACAAGCGCGGTAAGCGCATCCCTGTAGGAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae3b196e01c603eaff16a03ce560de862026b9280f7ed7a1c946020df336cc57
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank