Protein

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Genbank accession
QDJ96475.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MASNTNYNYSNSSATSNNAKGSGTSDPNQESRGELINARDAADRQSAAVAAEREWIKQVSAAPVSDTRKNNKIRLVSTATATGNGKINTGTEQITFNLTPEISESKQVIYAEIGDIRQAGSILIYGGSPSRRWSVNSKFLSRTAEEADSTWKSIQLLKAWGNPDTNYKYGIDSGTPYVLKLYGYGRTWQGIPVVLTSVNVDYASDVDFIPTVYGTNVPIIQTVSFQLTEARTPDDLLVKFDLEKFKRGILPEW
Physico‐chemical
properties
protein length:253 AA
molecular weight: 27790,50830 Da
isoelectric point:6,40100
aromaticity:0,09091
hydropathy:-0,49249

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xoo-sp13
[NCBI] 		2591401 No lineage information
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDJ96475.1 [NCBI]
Genbank nucleotide accession
MN047793 [NCBI]
CDS location
range 197419 -> 198180
strand +
CDS
ATGGCGTCAAATACAAATTACAACTATTCTAATAGTTCAGCCACCAGCAATAATGCTAAGGGTAGTGGTACTAGTGACCCGAATCAGGAGTCGCGTGGAGAACTTATTAATGCCCGCGATGCTGCTGATAGGCAGAGCGCTGCTGTGGCTGCTGAAAGAGAATGGATAAAGCAAGTATCTGCTGCCCCAGTAAGTGATACTAGAAAGAATAATAAAATTCGTCTAGTGAGTACTGCCACTGCAACAGGAAATGGTAAAATCAATACCGGAACTGAACAGATCACATTTAACCTGACTCCTGAAATTTCAGAATCTAAACAAGTCATCTATGCCGAAATTGGGGATATTCGACAGGCTGGGTCAATTTTAATTTATGGTGGTTCACCTAGTCGCCGTTGGTCAGTAAACTCCAAGTTCTTATCTAGAACCGCAGAAGAAGCAGACTCTACCTGGAAAAGTATCCAACTATTAAAAGCATGGGGTAACCCTGATACTAACTATAAGTATGGTATTGATTCTGGAACACCGTATGTTCTTAAATTATATGGTTACGGTAGAACATGGCAAGGTATCCCTGTAGTACTAACTTCAGTTAATGTGGATTATGCTTCTGACGTTGATTTCATTCCTACAGTATATGGTACTAATGTTCCAATAATTCAAACTGTGTCATTCCAATTAACTGAAGCTAGAACTCCTGATGATTTATTAGTCAAGTTCGATTTAGAGAAGTTTAAACGCGGTATCCTACCTGAGTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
21bef5518e8481d806dbd9613fab3a7830106a58b253247005b6d6026035fcbb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequence analysis of a novel phage Xoo-sp13 that infects Xanthomonas oryzae pv. oryzae Nazir,A., Dong,Z., Liu,J., Tong,Y. and Peng,D. 2021-02-14 — GenBank