Protein

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Genbank accession
YP_009621067.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MISNNAPAKMVLNSVVTGYTLAYIQHSIYSDYDVIGRSFWLKEGSNITRRDFTGVDTFSVTINNLKPTATYEVQGAFYDSIIDSELLNAQIGINLSDKQTFKMKSAPRITSARCESEPVDVGVGAPIVYLNTTGEADYCTIELKNNSNANNPWVKYYVGALMPTIMFGGVPVGSYKVRISGQVSLPDGVTIDSSGYYEYPTVFEVKYNFVSPTAPVNIVFKAARIADGKERYDLRVQWDWNRGTGANVREFVLSYIDSTEFAKTGWTKAQKINVGAAQSATIISFPWKVEHKFKVSSIAWGPNIQDTTDSTAQTFILNEDTPLDNNFVNETGIEVNYAYIKGKIKEGTTWKQTFLIDAATGAVNIGLLDAEGKAPISFDPIKKIVNVDGSVITKTINAANFVMTNLTGQDNPAIYTQGKTWGDAKSGIWMGMDNTNAKPKLDIGNATQYIRYDGDTLRISNKVVIGTPNGDVDLGTGMQGKQTVFVYKLASSLPAKPLEQDYPPPSWSKTPPNRTDMTQNIYVTTGTLDPVTNKLLVGTSWSDVVQWSGTEGTIGHDGQRGPGMYSLGISGLGGWNDSQANAFFQNNFGSPPVKYDVLTEFNSSAPQSAFTRQWNGSSWADPAMVLHGNMIVNGTVTASKIVANDAFLSQIGVNVIYDRNAALSNNPEASYRMKIDLATGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74861,24940 Da
isoelectric point:5,61248
aromaticity:0,10365
hydropathy:-0,25971

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
104–196
IPR057551
YP_009621067.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 212-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009621067.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 410 410 0,8818
Central domain 411 651 242 0,1617
C-terminal 652 685 33 0,8852
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-410
Central
411-651
C-terminal
652-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Sugarland
[NCBI] 		2053603 Uroviricota > Caudoviricetes > Demerecviridae > Sugarlandvirus sugarland >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009621067.1 [NCBI]
Genbank nucleotide accession
NC_042093 [NCBI]
CDS location
range 86179 -> 88236
strand -
CDS
ATGATTTCAAATAATGCACCAGCTAAAATGGTCCTAAATAGCGTCGTAACTGGATATACATTGGCGTATATCCAGCACTCTATCTACTCTGATTACGATGTTATAGGCAGATCTTTTTGGCTTAAAGAAGGTAGCAATATTACTCGTAGAGATTTTACTGGAGTTGATACCTTCTCTGTAACTATTAATAATCTAAAACCTACAGCAACGTATGAGGTTCAGGGTGCATTTTATGATTCTATAATAGACTCTGAACTACTTAATGCTCAGATAGGTATTAATCTGTCTGACAAACAAACTTTTAAAATGAAGTCAGCACCTAGAATCACGAGTGCTAGATGTGAATCAGAGCCGGTAGACGTAGGTGTTGGGGCACCAATAGTTTATCTAAATACTACGGGAGAAGCTGATTATTGTACTATAGAATTAAAAAATAATTCTAATGCTAATAATCCGTGGGTTAAATATTATGTTGGGGCATTAATGCCAACTATTATGTTTGGTGGTGTGCCAGTTGGGTCCTATAAAGTAAGAATTTCTGGACAAGTATCTCTACCAGATGGGGTAACTATTGATTCATCTGGCTACTATGAGTACCCTACTGTTTTTGAAGTTAAATATAACTTTGTATCACCTACAGCTCCAGTTAATATTGTATTTAAAGCTGCGCGTATAGCCGATGGTAAAGAACGCTATGATTTACGTGTACAATGGGATTGGAATAGAGGCACAGGCGCTAACGTTCGTGAATTCGTTCTATCCTATATAGATTCAACAGAATTTGCTAAAACTGGATGGACTAAGGCACAAAAAATCAACGTGGGGGCTGCTCAGTCGGCAACAATTATATCATTCCCCTGGAAGGTAGAACATAAATTTAAGGTGTCATCTATTGCTTGGGGACCAAATATACAGGATACTACTGATTCCACAGCACAGACATTTATACTAAATGAAGATACCCCACTTGATAATAATTTTGTTAACGAAACGGGTATAGAAGTTAACTATGCATACATTAAGGGTAAGATCAAAGAGGGCACAACCTGGAAACAAACCTTCCTAATAGATGCCGCCACTGGTGCTGTTAATATAGGTCTTCTAGACGCGGAAGGAAAAGCGCCAATATCTTTTGATCCTATTAAAAAGATTGTTAACGTTGATGGTAGTGTAATCACTAAAACTATTAATGCTGCTAATTTTGTCATGACTAACCTAACTGGTCAAGATAACCCGGCAATATATACACAAGGTAAAACTTGGGGAGATGCAAAGTCTGGTATTTGGATGGGTATGGATAATACCAATGCTAAACCTAAATTAGACATCGGTAACGCTACACAGTATATACGTTACGATGGTGATACATTAAGAATTTCTAATAAAGTTGTAATTGGTACACCAAATGGCGATGTGGATCTTGGTACAGGTATGCAAGGTAAACAAACAGTATTCGTTTATAAATTAGCATCCTCACTTCCTGCAAAACCACTAGAGCAAGATTATCCACCACCTAGTTGGTCGAAGACCCCACCTAACCGTACGGATATGACTCAAAATATCTATGTGACTACAGGTACACTTGATCCAGTAACTAATAAATTACTTGTAGGTACTAGCTGGTCAGATGTAGTTCAGTGGAGTGGTACTGAAGGTACAATTGGACACGATGGACAACGTGGTCCTGGGATGTACTCTTTAGGTATTTCTGGTCTTGGGGGTTGGAATGACAGCCAGGCTAATGCCTTCTTTCAGAATAATTTTGGTAGTCCTCCGGTTAAATATGACGTGTTGACTGAGTTTAATAGTAGTGCTCCACAATCTGCATTTACTCGTCAATGGAATGGCTCCAGTTGGGCTGACCCTGCGATGGTTTTACACGGCAATATGATAGTTAACGGCACGGTAACCGCTAGTAAGATTGTGGCGAATGATGCCTTCTTATCTCAGATCGGTGTTAACGTTATCTATGATAGAAATGCAGCGTTATCAAACAATCCTGAAGCCTCTTACAGAATGAAGATAGACCTAGCTACTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd648ce061c69b066b92a76f72c1ebdf88ea745d9e72c487e071a345231e4e09
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7789
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella pneumoniae bacteriophage Sugarland Erickson,S.G., Lessor,L., O'Leary,C.J., Gill,J.J. and Liu,M. 2018-11-15 — GenBank